swelborn/tomopyui

Issues

• Error in reading 'theta' in all analysis steps

  #57 opened 3 months ago by Z-Peter-Li
  2

• Cannot load APS dataset from Tomobank

  #56 opened 3 months ago by Z-Peter-Li
  4

• [feature] automated center of rotation finding as option in alignment/reconstruction

  #55 opened 7 months ago by swelborn
  0

• [feature] add option for simple slicing for downsampling

  #49 opened 9 months ago by swelborn
  0

• [bug] plot any analysis does not allow saving of reconstruction movies

  #16 opened 9 months ago by swelborn
  0

• Error when aligning prenormalized tiffs

  #35 opened 2 years ago by DoranPennington
  1

• [enhancement] add multiple center of rotation search

  #26 opened 3 years ago by swelborn
  1

• shift downsampled datasets instead of redownsampling shifted dataset

  #36 opened 3 years ago by swelborn
  0

• misc suggestions

  #1 opened 3 years ago by ianhi
  10

• Histogram fails when projection data are all zeros

  #9 opened 3 years ago by perlmutter
  9

• [feature idea] add calculation of histogram and downsampled reconstruction

  #15 opened 3 years ago by swelborn
  1

• No such file or directory with TIF import

  #33 opened 3 years ago by DoranPennington
  1

• unable to import .xrm

  #34 opened 3 years ago by DoranPennington
  1

• Manually updating quick path search bar throws error

  #8 opened 3 years ago by perlmutter
  2

• [enhancement] consider using pytorch for image processing functions for speedups

  #27 opened 3 years ago by swelborn
  0

• [improvement] saving to disk slower for raw projections. unsure reason, could be datatype.

  #23 opened 3 years ago by swelborn
  0

• [enhancement] instead of downsample factors below 1, use factors of 2 (speed improvements, less downsampling artifacts)

  #28 opened 3 years ago by swelborn
  1

• [feature] import prenormalized data

  #31 opened 3 years ago by swelborn
  1

• [bug] import normalized shows incorrect theta end angle theta value on multi-energy import

  #21 opened 3 years ago by swelborn
  0

• [bug] downsampling large datasets fails, memory allocation issue.

  #22 opened 3 years ago by swelborn
  1

• make option for various facilities or beamlines in main.py

  #29 opened 3 years ago by swelborn
  1

• [improvement] Create Metadata classes instead of saving in Projections

  #30 opened 3 years ago by swelborn
  1

• [bug] reconstructions using region of interest weird.

  #25 opened 3 years ago by swelborn
  1

• [improvement] Streaks in projections during alignment

  #24 opened 3 years ago by swelborn
  0

• put in overwrite energy/pixel size box for case where energy cannot be found in metadata

  #20 opened 3 years ago by swelborn
  1

• [speed improvement] look into 3d histogram by dask arrays.

  #18 opened 3 years ago by swelborn
  1

• [feature idea] add plots for last analysis performed immediately after analysis

  #17 opened 3 years ago by swelborn
  1

• [feature idea] add projection plotter in center tab to see this center of rotation

  #19 opened 3 years ago by swelborn
  1

• [feature idea] scale bar

  #3 opened 3 years ago by swelborn
  1

• re-initialize on import of new data

  #11 opened 3 years ago by swelborn
  1

• Zoom/rectangular selection functionality in import tab viewer

  #5 opened 3 years ago by perlmutter
  2

• raw import does not set align/reconstruct "imported projections" plotter

  #14 opened 3 years ago by swelborn
  0

• Viewing skewed aspect ratio images in import tab

  #6 opened 3 years ago by perlmutter
  1

• Loading status indicator for imports tab

  #4 opened 3 years ago by perlmutter
  1

• check that theta is not nan before passing to tomopy recon

  #12 opened 3 years ago by perlmutter
  1

• Default grayscaling of prenormalized data viewer in import tab

  #7 opened 3 years ago by perlmutter
  2

• [feature idea] feature for shifting one projection manually

  #2 opened 3 years ago by swelborn
  0