This repo contains the data associated with Oerlemans et al., currently unpublished.
All sequencing data can be found under ENA accession number PRJEB29686.
This repository contains:
-
metadata.tsv
: A metadata file that details the sample aliases, sample titles, the 16S rRNA gene variable region, the patient condition, the patient number, the technical repeat number and the run number -
V4
run_dada2.R
: The DADA script used for this studyAV_BV_V4.Rmd
: The R-Markdown file that details how the analysis was performedAV_BV_V4.html
: The HTML file that was created from the R-Markdown file.