Alignment Generator This project uses the REMINER II author's program "Alignment generator".

  • W.C.Kim, REMiner-II: A tool for rapid identification and configuration of repetitive element arrays from large mammalian chromosomes as a single query (2012)
  • Alignment Generator extracts the raw file of the alignment from the result of REMINER II software (.rem file).

From the raw alignment files, our MATLAB codes parses the result to analyze the informations in various ways.