syrodrigo

syrodrigo's Stars

• hgb-bin-proteomics/MSAnnika_exporters

  Export MS Annika crosslink results to different formats.

  Language:Python3

• dcartertod/zotero-plugins

  Terrifically small pieces of functionality

  Language:JavaScript1785

• ProteomicsML/ProteomicsML

  Community-curated tutorials and datasets for ML in proteomics

  Language:Jupyter Notebook467

• Vitek-Lab/MSstatsShiny

  R-Shiny GUI integrated with the MSstats package family

  Language:R138

• mafreitas/tdf2mzml

  Language:Python2514

• Roestlab/massdash

  MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization

  Language:HTML173

• MonashProteomics/FragPipe-Analyst

  Language:HTML125

• sokrypton/ColabFold

  Making Protein folding accessible to all!

  Language:Jupyter Notebook1.9k491

• dnusinow/cRomppass

  Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence

  Language:R95

• xx025/carrot

  Free ChatGPT Site List 这儿为你准备了众多免费好用的ChatGPT镜像站点

  17k1.4k

• Noble-Lab/casanovo

  De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model

  Language:Python11140

• smith-chem-wisc/MetaMorpheus

  Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

  Language:C#9046

• 4dsoftware/elemcor

  natural abundance and isotopic impurity correction

  Language:MATLAB61

• michalsta/opentims

  Open-source C++ and Python module for opening binary timsTOF data files.

  Language:C4413

• windingwind/zotero-better-notes

  Everything about note management. All in Zotero.

  Language:TypeScript5.5k188

• compomics/DeepLC

  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.

  Language:Python5519

• ZhuMetLab/MetDNA2

  Knowledge-guided multilayer network approach is executed in MetDNA2

  Language:R135

• ZhuMetLab/MetTracer

  Language:R83

• christophuv/PeakBot

  PeakBot - detection of chromatographic and mz profile-mode peaks in LC-HRMS data

  Language:Python161

• thermofisherlsms/pyeds

  Provides easy access to Thermo Discoverer platform results

  Language:Python144

• kevinkovalchik/RawTools

  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control analysis of Thermo Orbitrap raw mass spectrometer files from data-dependent acquisition experiments.

  Language:C#6419

• frallain/pymsfilereader

  Thermo MSFileReader Python bindings

  Language:Python6725

• bioFAM/MOFA2

  Multi-Omics Factor Analysis

  Language:R30452

• lux-org/lux

  Automatically visualize your pandas dataframe via a single print! 📊 💡

  Language:Python5.2k366

• sneumann/xcms

  This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

  Language:R18580

• jpquast/protti

  Picotti lab data analysis package.

  Language:R594

• nextflow-io/nextflow

  A DSL for data-driven computational pipelines

  Language:Groovy2.7k628

• nf-core/diaproteomics

  Automated quantitative analysis of DIA proteomics mass spectrometry measurements.

  Language:Nextflow1412

• grosenberger/easypqp

  EasyPQP: Simple library generation for OpenSWATH

  Language:Python1013

• vxiaov/free_proxy_ss

  分享免费梯子/科学上网/代理/shadowsocks(SS)/ShadowsocksR(SSR)/V2ray(vmess)代理，2小时更新一次，分享Clash代理订阅源和配置文件订阅链接。

  2.4k466