Systems Ecology Group
Our activities focus on the modelling and analysis of complex biological, ecological, and socioeconomic systems
Bremen, Germany
Pinned Repositories
AMT
Image-recognition type algorithm for extracting morphological trait data from fish photographs.
Automatic-Measurements-of-Fishes-physical-traits-V2
BayBoxTOY
Differential Equation-Based toy model for studying carbon fluxes in a bay
CoralZooxProjection
Adaptive trait dynamics model used to simulate future projections of coral and algae biomasses under low (RCP 2.6), moderate (RCP 4.5) and high (RCP 8.5) warming scenarios.
CoralZooxSymb
Code used for the manuscript "A Trait-Based Model for Describing the Adaptive Dynamics of Coral-Algae Symbiosis"
InsidePhy
A python package for modelling inter- and intra-specific size variability of phytoplankton communities grown under laboratory conditions.
noise-in-opinion-dynamics
Different types of noise that affect opinion dynamics implemented in the bounded confidence model by Deffuant et al. (2000).
OGUMIclient
PhytoSFDM
A python package to quantify phytoplankton community size structure in the ocean
PlanktonBS
Differential Equation-Based Model for studying the seasonal succession of phytoplankton in the Bering Sea.
Systems Ecology Group's Repositories
systemsecologygroup/PhytoSFDM
A python package to quantify phytoplankton community size structure in the ocean
systemsecologygroup/Automatic-Measurements-of-Fishes-physical-traits-V2
systemsecologygroup/BayBoxTOY
Differential Equation-Based toy model for studying carbon fluxes in a bay
systemsecologygroup/CoralZooxProjection
Adaptive trait dynamics model used to simulate future projections of coral and algae biomasses under low (RCP 2.6), moderate (RCP 4.5) and high (RCP 8.5) warming scenarios.
systemsecologygroup/CoralZooxSymb
Code used for the manuscript "A Trait-Based Model for Describing the Adaptive Dynamics of Coral-Algae Symbiosis"
systemsecologygroup/InsidePhy
A python package for modelling inter- and intra-specific size variability of phytoplankton communities grown under laboratory conditions.
systemsecologygroup/PlanktonBS
Differential Equation-Based Model for studying the seasonal succession of phytoplankton in the Bering Sea.
systemsecologygroup/AMT
Image-recognition type algorithm for extracting morphological trait data from fish photographs.
systemsecologygroup/CoralZooxShuffle
systemsecologygroup/EasterIslandABM
An Agent-Based Model that simulates the spatial and temporal dynamics of household agents on Easter Island and their interactions with a spatially explicit and realistic natural environment prior to European arrival.
systemsecologygroup/noise-in-opinion-dynamics
Different types of noise that affect opinion dynamics implemented in the bounded confidence model by Deffuant et al. (2000).
systemsecologygroup/OGUMIclient
systemsecologygroup/BirdsABM
Agent-Based Model for studying waterbird habitat use in coastal lagoon-like environments
systemsecologygroup/Calcisphere
Calculate the energy requirements for calcium transport into vesicles vs over the plasma membrane in calcifying nannoplankton.
systemsecologygroup/CoopFishABM
Agent-Based Model for studying the effects of different MPA designs and cooperation levels on fish abundance and catch
systemsecologygroup/NCD_Global_2024
Files related to the paper 'Relevance of non-cyanobacterial N2 fixation in the global ocean'
systemsecologygroup/OGUMIserver
systemsecologygroup/PlAcE_R
Plastic Accumulation Estimation using R (PlAceR)
systemsecologygroup/SbNPZD_Exclusion
Size-based NPZD model for understanding phytoplankton exclusion patterns (co-occurrence and exclusion time scales)
systemsecologygroup/Sizeb_NPZD
Size-based NPZD model for understanding phytoplankton community size structure
systemsecologygroup/social-identity-in-opinion-dynamics
Model to study the effect of in-group bias on consensus formation in virtual societies
systemsecologygroup/TempSizeMod
Size-based NPZD model for forecasting the effects of temperature on phytoplankton community compositions in a temperate lake