szuwalski/GeMS

Issues

• Sloped HCRs

  #41 opened 6 years ago
  0

• FMSY Being wonky

  #40 opened 6 years ago
  0

• Time-Varying Growth

  #39 opened 6 years ago
  0

• user specified harvest control rules

  #38 opened 6 years ago
  0

• Production Model Output

  #37 opened 6 years ago
  1

• Check error structure of data collection

  #36 opened 7 years ago
  0

• Plotting comparison of the fits of age-structured models

  #35 opened 6 years ago
  1

• Fix problem when survey selectivity > Linf -> NaN

  #34 opened 7 years ago
  1

• Include timeseries of estimated parameters for production models

  #33 opened 7 years ago
  0

• Troubleshooting and guidance

  #32 opened 7 years ago
  0

• Parallelize code

  #31 opened 7 years ago
  1

• Make sure only values for parameters that are estimated are jittered in the PIN file

  #30 opened 7 years ago
  0

• Make sure all reference points are reported for all harvest control rules

  #29 opened 7 years ago
  2

• Add an echo input file for debugging

  #28 opened 7 years ago
  1

• Movement between areas when life history is different needs to be reconsidered

  #27 opened 7 years ago
  0

• Fix the proxy reference points

  #26 opened 7 years ago
  0

• Insert ability to use MSY reference points instead of just proxies

  #25 opened 7 years ago
  1

• Selectivity vs. age?

  #24 opened 7 years ago
  0

• Add autocorrelation in recruitment

  #23 opened 9 years ago
  0

• Allow for conditioning on estimated recruitment

  #22 opened 9 years ago
  0

• Rewrite operating model specification plotting functions

  #21 opened 8 years ago
  0

• Write function to look for retrospective biases

  #20 opened 9 years ago
  1

• Allow user to specify what period of time to set as 'reference point' when processes are time varying

  #19 opened 8 years ago
  0

• Allow time samplign parameters to vary over time

  #18 opened 8 years ago
  0

• Add in catch sampling

  #17 opened 9 years ago
  0

• Length of LengtBins

  #16 opened 8 years ago
  1

• Fix the way fishing mortality is apportioned to an area

  #15 opened 8 years ago
  0

• Include economics

  #14 opened 9 years ago
  0

• Calculate FMSY, BMSY, MSY within the agestructured assessment

  #13 opened 9 years ago
  0

• Allow for different harvest control rules

  #12 opened 9 years ago
  1

• New assessment methods

  #11 opened 9 years ago
  0

• Create a wrapper function

  #10 opened 8 years ago
  0

• Making summary plotting functions

  #9 opened 8 years ago
  0

• Set up code to spit out a single MSE object

  #8 opened 9 years ago
  0

• Ability to turn off assessment

  #7 opened 9 years ago
  1

• Function for calculating maximum sustainable yield

  #6 opened 9 years ago
  1

• Develop vignette

  #5 opened 9 years ago
  0

• Make inputs as control files

  #4 opened 9 years ago
  1

• Consolidate output graphs

  #3 opened 8 years ago
  0

• Insert time-varying growth, natural mortality, and selectivity into assessment method

  #2 opened 8 years ago
  0

• Fix survey index

  #1 opened 9 years ago
  1