Pinned Repositories
LambdaPP
VESPA
VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5.
banking-system
Clean Code - Architecture 3 - Coding Example
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
docker-minecraft-server
Docker image that provides a Minecraft Server that will automatically download selected version at startup
fitnesse-html-util
Clean Code - Functions - Refactoring Example
FlatProt
A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
jdime
syntactic merge tool for java
TMVisDB
TMvisDB provides per-residue transmembrane topology annotations for all proteins in AlphaFold DB (~ 200 million proteins, September '22) predicted as transmembrane proteins (~ 46 million).
protspace_d3
Vizualize your protein dataset in 2D space
t03i's Repositories
t03i/TMVisDB
TMvisDB provides per-residue transmembrane topology annotations for all proteins in AlphaFold DB (~ 200 million proteins, September '22) predicted as transmembrane proteins (~ 46 million).
t03i/FlatProt
A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
t03i/banking-system
Clean Code - Architecture 3 - Coding Example
t03i/BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
t03i/docker-minecraft-server
Docker image that provides a Minecraft Server that will automatically download selected version at startup
t03i/fitnesse-html-util
Clean Code - Functions - Refactoring Example
t03i/jdime
syntactic merge tool for java
t03i/lambda.predictprotein.org
Front-end for lambdaPP
t03i/latex-project-template
A template for a modular LaTeX project
t03i/nmt
TensorFlow Neural Machine Translation Tutorial
t03i/SeqVec
Modelling the Language of Life - Deep Learning Protein Sequences