Pinned Repositories
2018_ASM_Workshop
Case study tutorial on using R to analyze microbiome data prepared for the 2018 ASM General Meeting in Atlanta, GA.
2014-tutorials
Archive of the 2014 tutorials
2016-tutorials
repo for 2016 EDAMAME tutorials
ados
angus
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
asm2017ados
ASM2018-Poster
Microbial Community Structure and Biogeochemistry of Three Small Eutrophic Lakes - Poster Presented by Joe James at ASMicrobe2018
bioinformatics
random collection of scripts used to process sequences
ConditionallyRareTaxa
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
fastablast
Functions for coupling mothur fasta files with blast
tallcuppajoe's Repositories
tallcuppajoe/2018_ASM_Workshop
Case study tutorial on using R to analyze microbiome data prepared for the 2018 ASM General Meeting in Atlanta, GA.
tallcuppajoe/2014-tutorials
Archive of the 2014 tutorials
tallcuppajoe/2016-tutorials
repo for 2016 EDAMAME tutorials
tallcuppajoe/ados
tallcuppajoe/angus
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
tallcuppajoe/asm2017ados
tallcuppajoe/ASM2018-Poster
Microbial Community Structure and Biogeochemistry of Three Small Eutrophic Lakes - Poster Presented by Joe James at ASMicrobe2018
tallcuppajoe/bioinformatics
random collection of scripts used to process sequences
tallcuppajoe/ConditionallyRareTaxa
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
tallcuppajoe/fastablast
Functions for coupling mothur fasta files with blast
tallcuppajoe/gom_16s
useful files for analysis in mothur of 16S genes sequences using earth microbiome project primes on miseq
tallcuppajoe/harwell
tallcuppajoe/Jax18S
tallcuppajoe/JaxQPCR
tallcuppajoe/JL-16S
tallcuppajoe/Jones_R_Files
tallcuppajoe/metals
tallcuppajoe/MICRoN-16S-mothur
tallcuppajoe/MICRoN-18S-mothur-RD
tallcuppajoe/minimalR
tallcuppajoe/mockrobiota
A public resource for microbiome bioinformatics benchmarking.
tallcuppajoe/PAPER_LeeSorensen_inprep
Workflows and R scripts for Lee and Sorensen et al
tallcuppajoe/singletons
Meeting ideas for helping people coming to a meeting alone
tallcuppajoe/tallcuppajoe.github.io
tallcuppajoe/thrash_script
tallcuppajoe/wed
mesocosm nutrient exposure periphyton