talmo
Principal Investigator and Salk Fellow at the Salk Institute. Running a lab that uses deep learning to study the brain, behavior, plants and more.
@talmolab La Jolla, CA
Pinned Repositories
gpuhackathon-sleap
leap
LEAP is now deprecated -- check out its successor SLEAP!
leap_rigs
Code for running experiments on the LEAP rigs.
sleap-mit-tutorial
Slides, code and data for SLEAP tutorial at MIT on July 9, 2020.
talmos-toolbox
conda_packages
sleap
A deep learning framework for multi-animal pose tracking.
talmo's Repositories
talmo/leap
LEAP is now deprecated -- check out its successor SLEAP!
talmo/sleap-mit-tutorial
Slides, code and data for SLEAP tutorial at MIT on July 9, 2020.
talmo/talmos-toolbox
talmo/leap_rigs
Code for running experiments on the LEAP rigs.
talmo/gpuhackathon-sleap
talmo/condalab
MATLAB utility to switch between Anaconda environments
talmo/donttouchyourface
talmo/gramm
Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.
talmo/MotifSearch
A way to discover new transcription factor binding motifs in a genome based on different scoring methods.
talmo/ndx-pose
NWB extension to store pose estimation data
talmo/StitchEM
A set of tools for serial electron microscopy image stitching and alignment.
talmo/hpctools
This package provides a set of utilities for interacting with the SLURM job scheduler on an HPC cluster through Python (over ssh).
talmo/janky-calibrate
talmo/jupyterlab_sublime
A slightly opinionated Sublime notebook cell keybinding for JupyterLab.
talmo/MyST-NB
Parse and execute ipynb files in Sphinx
talmo/recipes
Recipes to build the packages for the emscripten-forge distribution
talmo/release_webview
Pilot for rendering release notes markdown in Qt.
talmo/ShareMySchedule
A Google Chrome extension to allow easier sharing of your UMBC schedule.
talmo/SimpleElastix
User-friendly medical image registration library
talmo/sleap-io
Standalone utilities for SLEAP pose tracking data.
talmo/sleap-io-feedstock
A conda-smithy repository for sleap-io.
talmo/sleap-io-notebook
talmo/slp-to-csv
Didactic package that converts SLP files to CSVs.
talmo/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
talmo/tfjs-models
Pretrained models for TensorFlow.js
talmo/website
Personal website.