Pinned Repositories
Bracken
Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.
centrifuge
Classifier for metagenomic sequences
cloudbleed-browser-scan
Check browser history on Mac for CloudBleed domains.
cookiecutter-aws-sam-s3-rekognition-dynamodb-python
SAM app that uses AWS Rekognition APIs to detect text in S3 Objects and stores the text in DynamoDB.
kraken
Kraken taxonomic sequence classification system
metapathways2
MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds
passlok
PassLok privacy app
RCyc
Bidirectional interface between SRI's Pathway Tools software and R
scripts
Miscellaneous scripts that serve a stand-alone purpose that might be useful for others.
taltman's Repositories
taltman/scripts
Miscellaneous scripts that serve a stand-alone purpose that might be useful for others.
taltman/RCyc
Bidirectional interface between SRI's Pathway Tools software and R
taltman/cloudbleed-browser-scan
Check browser history on Mac for CloudBleed domains.
taltman/kraken
Kraken taxonomic sequence classification system
taltman/Bracken
Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.
taltman/centrifuge
Classifier for metagenomic sequences
taltman/cookiecutter-aws-sam-s3-rekognition-dynamodb-python
SAM app that uses AWS Rekognition APIs to detect text in S3 Objects and stores the text in DynamoDB.
taltman/metapathways2
MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds
taltman/passlok
PassLok privacy app
taltman/SARS-CoV-2_Sequencing
taltman/sites-using-cloudflare
:broken_heart: List of domains using Cloudflare DNS (potentially affected by the CloudBleed HTTPS traffic leak)
taltman/taltman.github.io
My website
taltman/TextSecure-Browser
TextSecure as a Chrome Extension
taltman/vadr
Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation