Prebiotic project - microbiome

R code for analyzing BMT303 trial shotgun microbiome data

How to use:

  1. Clone this repo

    git clone https://github.com/tamburinif/prebio.git

  2. Run the code -- either open the R script in Rstudio and highlight/run code, or run on the command line:

    R prebio.R

    You may have to install some/all of the required packages on your system -- this can be done in Rstudio, e.g.

    install.packages("ggplot2")