Tao Liu Lab at Roswell Park

Pinned Repositories

atac-seq-pipeline
ENCODE ATAC-seq pipeline
Language:Python00
biopython
Official git repository for Biopython (converted from CVS)
Language:Python00
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
Language:Python00
galaxy
Data intensive science for everyone.
Language:Python00
genomics-analysis-pipelines
Pipeline codes for analyzing various genomics datasets
Language:Python38
HMMRATAC
HMMRATAC peak caller for ATAC-seq data
Language:Java00
MACS
MACS -- Model-based Analysis of ChIP-Seq
Language:Python00
pHMMRATAC
Python version HMMRATAC https://github.com/LiuLabUB/HMMRATAC
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pyBigWig
A python extension for quick access to bigWig and bigBed files
Language:C00
SAPPER
SAPPER -- call variance from ChIP-Seq directly
Language:Python00

Tao Liu Lab at Roswell Park's Repositories

taoliulab/genomics-analysis-pipelines
Pipeline codes for analyzing various genomics datasets
Language:Python38
taoliulab/atac-seq-pipeline
ENCODE ATAC-seq pipeline
Language:Python00
taoliulab/biopython
Official git repository for Biopython (converted from CVS)
Language:Python00
taoliulab/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
Language:Python00
taoliulab/galaxy
Data intensive science for everyone.
Language:Python00
taoliulab/HMMRATAC
HMMRATAC peak caller for ATAC-seq data
Language:Java00
taoliulab/MACS
MACS -- Model-based Analysis of ChIP-Seq
Language:Python00
taoliulab/pHMMRATAC
Python version HMMRATAC https://github.com/LiuLabUB/HMMRATAC
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taoliulab/pyBigWig
A python extension for quick access to bigWig and bigBed files
Language:C00
taoliulab/SAPPER
SAPPER -- call variance from ChIP-Seq directly
Language:Python00
taoliulab/taoliulab.github.io
http://taoliulab.github.io or https://lab.biomisc.org/
Language:HTML