tbepler/topaz

particles format

jianhaoc opened this issue · 1 comments

jianhaoc commented

Hi, I see in the "topaz convert -s 8 -o data/EMPIAR-10025/processed/particles.txt data/EMPIAR-10025/rawdata/particles.txt" (https://github.com/tbepler/topaz/blob/master/tutorial/01_quick_start_guide.ipynb). I wonder what is the format of particles.txt? Is it a file containing particles of all micrographs? Thank you!

tbepler commented

Here's a sample particles file. It should contain particles for all of the micrographs you want to train on. There's also more information here

sample_particles.txt