Pinned Repositories
adam
A genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
battleship
Board games for my daughter
bigwig4j
A BigWig Reader, in Java
data-use-ontology
A simple ontology for representing data use and research purpose constraints.
datamining-36-350-homework
Source Code for Fall 2009 36-350 Homework
djeocoder
A standalone geocoder, derived from the OpenBlock use of GeoDjango.
ideals
Experimentation with computer algebra in Java
java-obo
Java library for parsing and handling OBO ontologies.
musee
Dynamic web app 'presentations', driven by user scrolling, inspired by the NYT
rasch-model
Implementation of a Rasch Model
tdanford's Repositories
tdanford/djeocoder
A standalone geocoder, derived from the OpenBlock use of GeoDjango.
tdanford/java-obo
Java library for parsing and handling OBO ontologies.
tdanford/bigwig4j
A BigWig Reader, in Java
tdanford/cell-type
Code for working with the Cell Type (CL) Ontology
tdanford/chrome-cli
Control Google Chrome from the command line
tdanford/java-json-schema
Java implementation of a JSON Schema loader and validator
tdanford/neurocommons
Mirror(s) of Packages from Neurocommons
tdanford/nrc-wildlife
Code for Rachel's Wildlife Projects
tdanford/ontologies
Work-related Ontology Development
tdanford/ontology-broker-tests
Validation and Test Code for the Ontological Term Broker
tdanford/osm-utils
Utilities for OSM (Open Street Map) Data.
tdanford/rdf-utils
Utilities for working with RDF data.
tdanford/text-corrector
Text Rewriting Rules for Free-Text Parsing and Validation
tdanford/data-use-ontology
A simple ontology for representing data use and research purpose constraints.
tdanford/BayesDB
A Bayesian database for querying the probable implications of data as easily as SQL databases query the data itself
tdanford/bwa
Burrow-Wheeler Aligner
tdanford/datacleaning
Simple scripts for data munging and cleaning.
tdanford/datalog-experiment
Scala experiments with Datalog
tdanford/ffauto
Tools for managing my fantasy football draft and team.
tdanford/graphite-experiment
Setting up Graphite inside of Vagrant.
tdanford/letterplayer
An interface to evaluate Letterpress games, and suggest alternative plays.
tdanford/noaa-postgis
Enabling searching geo data from NOAA using Postgis and Postgresql
tdanford/obroker
An implementation of a web-broker for new term requests to an ontology.
tdanford/ott-data
tdanford/pybamview
Browser based application for viewing bam alignments
tdanford/scheduling-simulator
Simulator for writing and evaluating cloud schedulers
tdanford/snark
A nested vector library for Scala.
tdanford/spark-start
Template for starting with Spark
tdanford/sunfish
Sunfish: a Python Chess Engine in 111 lines of code
tdanford/table-service
Turning simple text tables into web services.