thanushipeiris

thanushipeiris's Stars

• IDEA-Research/Grounded-Segment-Anything

  Grounded SAM: Marrying Grounding DINO with Segment Anything & Stable Diffusion & Recognize Anything - Automatically Detect , Segment and Generate Anything

  Language:Jupyter Notebook14.9k1.4k

• ziqi-jin/finetune-anything

  Fine-tune SAM (Segment Anything Model) for computer vision tasks such as semantic segmentation, matting, detection ... in specific scenarios

  Language:Python76755

• ossu/computer-science

  🎓 Path to a free self-taught education in Computer Science!

  171k21.6k

• pyapp-kit/magicgui

  build GUIs from type annotations

  Language:Python36149

• constantinpape/heimdall

  Python based viewer for large mulit-dimensional datasets.

  Language:Python201

• BiAPoL/Bio-image_Analysis_with_Python

  Lecture materials "Bio-image analysis, biostatistics, programming and machine learning for computational biology" at the Center of Molecular and Cellular Bioengineering (CMCB) / University of Technology, TU Dresden

  Language:Jupyter Notebook19647

• napari/napari.github.io

  website for the napari image viewer

  4443

• MBSI-Inc/Bioinformatics-Workshops

  Language:Jupyter Notebook11

• RiosGroup/STAPL3D

  SegmenTation Analysis by ParaLlelization of 3D Datasets

  Language:Python93

• abreheret/PixelAnnotationTool

  Annotate quickly images.

  Language:C++1.4k307

• quantumjot/btrack

  Bayesian multi-object tracking

  Language:Python31050

• jni/skan

  Python module to analyse skeleton (thin object) images

  Language:Python11839

• firstcontributions/first-contributions

  🚀✨ Help beginners to contribute to open source projects

  44.8k78.3k

• jni/lma-2021-bioimage-analysis-python

  "Bioimage analysis in Python" workshop at LMA2021

  Language:Jupyter Notebook94

• JHLiu7/EarlyDRGPrediction

  Language:Python131

• d2l-ai/d2l-en

  Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

  Language:Python23.3k4.3k

• dougollerenshaw/figrid

  Utilities for formatting matplotlib figures

  Language:Jupyter Notebook271

• AllenCellModeling/fish_morphology_code

  Basic code and automated workflows to produce analysis friendly data from annotated FISH images

  Language:Python32

• juglab/DenoiSeg

  Joint training of denoising and segmentation.

  Language:Jupyter Notebook6521

• idyll-lang/idyll

  Create explorable explanations and interactive essays.

  Language:JavaScript2k87

• fmi-basel/LSTree

  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.

  Language:Python17

• datacarpentry/image-processing

  Image Processing with Python

  Language:HTML96120

• JacobBumgarner/VesselVio

  An open-source application for the analysis and visualization of segmented vasculature datasets

  Language:Python10022

• aramis-lab/clinica

  Software platform for clinical neuroimaging studies

  Language:Python22074

• kjw0612/awesome-deep-vision

  A curated list of deep learning resources for computer vision

  10.8k2.8k

• awoloshuk/NephNet

  A deep learning tool for in situ cell classification of human kidney cells

  Language:Jupyter Notebook11

• rohdelab/cell-image-classification

  Cell image classsification with neural networks (MLP, ConvNet) and other statistical ML models (SVM, LDA, LR, etc.).

  Language:Python246

• lmoroney/dlaicourse

  Notebooks for learning deep learning

  Language:Jupyter Notebook5.7k5.4k

• 3b1b/manim

  Animation engine for explanatory math videos

  Language:Python62.9k5.8k

• DavyCats/KeyGenes

  Language:HTML3