theislab/scib-pipeline

mouse brain dataset is not available?

yuxiaokang-source opened this issue · 5 comments

yuxiaokang-source commented

It's a wonderful work, I have found all datasets but mouse brain dataset on https://figshare.com/articles/dataset/Benchmarking_atlas-level_data_integration_in_single-cell_genomics_-_integration_task_datasets_Immune_and_pancreas_/12420968?
Could you provide the mouse brain dataset? Thank you very much

LuckyMD commented

Hi @yuxiaokang-source,

That's a very good point. I have tried to upload the mouse brain dataset several times, but it's so large that the upload is often timed out and then fails. I will try again in the next days.

mumichae commented

Is this resolved?

LuckyMD commented

no, :/... do you want to try to upload to figshare @mumichae ?

yuxiaokang-source commented

If you fail to upload to figshare, would you mind to provide another download link for users to download? Thank you very much

mbuttner commented

Can we try zenodo? That platform might have a higher file size limit than figshare.