thejanzimmermann
Circuit enthusiast, silicon(E) / organic. Associate Prof. of Neuroscience at UMN / Center for Magnetic Resonance Research
University of MinnesotaMinneapolis
Pinned Repositories
oculomatic-release
High Speed Eye Tracking for Point Gray USB3.0 Cameras
abcTau
a Python package for unbiased estimation of timescales and hypothesis testing
asm-workflow
Workflow for collecting human keypoint annotations using Amazon SageMaker
ASWC
Simulation and Data for the Average Sliding Window Correlation method. doi: 10.1002/hbm.24509
autopilot
Distributed behavioral experiments
GUI
Software for electrophysiology data acquisition
Impalyzer
Impedance (spectrum) analyzer for microelectrodes based on AD5933
MonkeyLogic_stable
Stable version of MonkeyLogic
ofxvideograbberptgrey
Automatically exported from code.google.com/p/ofxvideograbberptgrey
wave_clus
A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering
thejanzimmermann's Repositories
thejanzimmermann/abcTau
a Python package for unbiased estimation of timescales and hypothesis testing
thejanzimmermann/asm-workflow
Workflow for collecting human keypoint annotations using Amazon SageMaker
thejanzimmermann/ASWC
Simulation and Data for the Average Sliding Window Correlation method. doi: 10.1002/hbm.24509
thejanzimmermann/autopilot
Distributed behavioral experiments
thejanzimmermann/Impalyzer
Impedance (spectrum) analyzer for microelectrodes based on AD5933
thejanzimmermann/capex
CAPE using text-graphs
thejanzimmermann/DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals
thejanzimmermann/DLCconverterDLT
functions for for converting data from DeepLabCut formatting to DLTdv tools or Argus format
thejanzimmermann/eyeloop
EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.
thejanzimmermann/gift
Group ICA/IVA software (MATLAB)
thejanzimmermann/gpu-camera-sample
Image processing software on GPU (Windows, Linux, ARM) for real time machine vision camera applications. Performance benchmarks and Glass-to-Glass time measurements. MIPI CSI cameras support. RAW2RGB processing on CUDA with 16-bit ISP. Software for Jetson.
thejanzimmermann/JARVIS-AcquisitionTool
AcquisitionTool to record multi-camera recordings for the JARVIS 3D Markerless Pose Estimation Toolbox
thejanzimmermann/Kilosort
Fast spike sorting with drift correction for up to a thousand channels
thejanzimmermann/NeoAnalysis
thejanzimmermann/NGNIv1-Platform
Released resources for NGNIv1 online real-time spike sorting platform
thejanzimmermann/NMT
NIMH Macaque Template
thejanzimmermann/ofxAddonLib
A props file to setup properties for addons as projects (Visual Studio)
thejanzimmermann/ofxLiquidEvent
Lambda driven events system for openFrameworks for functional programming possibilities
thejanzimmermann/ofxMachineVision
Interfaces and helpers for working with machine vision cameras
thejanzimmermann/ofxSingleton
Singleton pattern for classes (doesn't need to be with openFrameworks, but we're laying it out like it is)
thejanzimmermann/ofxSpinnaker
openframeworks addon for interfacing with FLIR (ne Point Grey) cameras
thejanzimmermann/openFrameworks
openFrameworks is a community-developed cross platform toolkit for creative coding in C++.
thejanzimmermann/Planner
MR Guided Planning Software
thejanzimmermann/pycar
python code for RAICAR and BICAR
thejanzimmermann/pypreclin
thejanzimmermann/QtOpenCVViewerGl
Qt widget to display OpenCV images in an OpenGL frame
thejanzimmermann/RheMAP
Non-linear warps between common rhesus macaque brain templates
thejanzimmermann/TMC26XStepper
thejanzimmermann/tMKL
Resting State Dynamics Meets Anatomical Structure: Temporal Multiple Kernel Learning (tMKL) Model
thejanzimmermann/undivid
Undistort videos using OpenCV.