themattinthehatt

lightning-pose

Accelerated pose estimation and tracking using semi-supervised convolutional networks.

Pose-app

A Lightning app for animal pose estimation.

deepgraphpose

DeepGraphPose

eks

Ensembling and kalman smoothing for pose estimation

behavenet

Toolbox for analyzing behavioral videos and neural activity

daart

Deep learning for animal action recognition toolbox

dreamscape

Playing around with generative models trained on natural images, along with (eventually) some visualization tools.

lightning-pose-2024-nat-methods

Code to reproduce the figures in the Lightning Pose 2024 Nature Methods paper.

netlds

rlvm

MATLAB implementation of a rectified latent variable model for analysis of neural time series data.

themattinthehatt/behavenet

Toolbox for analyzing behavioral videos and neural activity

themattinthehatt/daart

Deep learning for animal action recognition toolbox

themattinthehatt/dreamscape

Playing around with generative models trained on natural images, along with (eventually) some visualization tools.

themattinthehatt/rlvm

MATLAB implementation of a rectified latent variable model for analysis of neural time series data.

themattinthehatt/lightning-pose-2024-nat-methods

Code to reproduce the figures in the Lightning Pose 2024 Nature Methods paper.

themattinthehatt/netlds

themattinthehatt/daart_utils

Utilities for training and analyzing daart models

themattinthehatt/Tubeworld

A fantastical journey into a primitive 3D world that is probably what the inside of a computer looks like.

themattinthehatt/vid-viz

A collection of image manipulation tools in Python/OpenCV for creating visualizations out of source videos

themattinthehatt/whiteway-et-al-2019-nbdt

Code for running analyses in Whiteway et al 2019

themattinthehatt/themattinthehatt.github.io

Personal webpage

themattinthehatt/Caltech_DATASAI_Neuroscience_23

A course organized by the Chen Institute for Neuroscience at Caltech on data analysis techniques in neuroscience

themattinthehatt/convNIM

Extension of the NIM to handle convolution of subunit outputs with learned kernels.

themattinthehatt/eks_data

Example data for EKS

themattinthehatt/gam

A generalized affine model for analysis of neural time series data.

themattinthehatt/js-sketches

A collection of sketches in javascript and three.js

themattinthehatt/lightning

Build and train PyTorch models and connect them to the ML lifecycle using Lightning App templates, without handling DIY infrastructure, cost management, scaling, and other headaches.

themattinthehatt/tf-deepdream

Playing around with deep dream - because there are never enough eyes.

themattinthehatt/tubeworld-ogl

A 3D polygon world built with C++/OpenGL

themattinthehatt/tutorials

A collection of coding tutorials I've worked on over the years