theo-allnutt-bioinformatics
I am a bioinformatician and molecular biologist with over 25 years' experience. Available for freelance and contract hire on analysis and programming projects.
Theo Allnutt BioinformaticsGeelong, Australia
Pinned Repositories
031_lduffy_csiro
033_glen
033 analysis scripts and pipeline, masterscript = genomes.sh
070_stat_RNAseq
071_metagenomics_course
circles
Draw blast ring diagrams
metagenomics
scripts for metagenomics
pangenome_using_uclust
RNAseq
RNAseq pipeline
scripts
bioinformatic scripts
VBA_scripts
Various scripts for data processing in Microsoft Excel
theo-allnutt-bioinformatics's Repositories
theo-allnutt-bioinformatics/circles
Draw blast ring diagrams
theo-allnutt-bioinformatics/scripts
bioinformatic scripts
theo-allnutt-bioinformatics/031_lduffy_csiro
theo-allnutt-bioinformatics/033_glen
033 analysis scripts and pipeline, masterscript = genomes.sh
theo-allnutt-bioinformatics/070_stat_RNAseq
theo-allnutt-bioinformatics/071_metagenomics_course
theo-allnutt-bioinformatics/metagenomics
scripts for metagenomics
theo-allnutt-bioinformatics/pangenome_using_uclust
theo-allnutt-bioinformatics/RNAseq
RNAseq pipeline
theo-allnutt-bioinformatics/VBA_scripts
Various scripts for data processing in Microsoft Excel
theo-allnutt-bioinformatics/Allnutt_etal_2020_expanding_the_taxonomic
Supplmentary data for the publication
theo-allnutt-bioinformatics/Dewar_etal_2021
Bioinformatic analyses for the publication, Dewar et al., 2019
theo-allnutt-bioinformatics/entropy
Scripts for entropy calculation and filtering
theo-allnutt-bioinformatics/genomes_update
Search NCBI for latest genome and sequence data for a specified taxon
theo-allnutt-bioinformatics/Hasebe_2019
Pipeline and scripts for the publication Hasebe et al., 2019.
theo-allnutt-bioinformatics/HybPiper
Recovering genes from targeted sequence capture data
theo-allnutt-bioinformatics/Indigenous_gut_mircobiome_2023
Indigenous_gut_mircobiome_2023
theo-allnutt-bioinformatics/King_etal_2018
theo-allnutt-bioinformatics/MiCoP
theo-allnutt-bioinformatics/milton-contrib
Useful scripts and other files for the WEHI HPC
theo-allnutt-bioinformatics/public-data
theo-allnutt-bioinformatics/R-scripts
theo-allnutt-bioinformatics/slides
theo-allnutt-bioinformatics/standard_conditions
theo-allnutt-bioinformatics/Trevathan-Tackett_2018