This project is used to compile R on Windows using the fast openblas BLAS library as a fast alternative to R's native BLAS.
First, I am grateful to Avraham Adler for his excellent blog post covering this topic. If you want to read his script--which this package mostly follows-- please do so.
Prerequisites:
The key difficultly in getting this to work is R is built using the GNU tools which have sometimes spotty and confusing windows support. However, the key elemenets are that you need to download the following:
- Rtools Used for the actual
gccandgfortrancompilers. - MiKTeX Portable R builds a ton of documentation as HTML and PDF files.
- Appveyor Is an online continuous integration system that essentially runs Windows buils.
- openblas is needed. A version specfically compiled for R for Windows can be found here: https://github.com/thequackdaddy/OpenBLASR
Strategy:
The GNU make tools can be configured using environment variables. For the most
part, that's the approach I have taken. The environment variables are configured
using the appveyor.yml file. In addition, one file must be edited/copied
because it explicitly uses driver names which are not used for Windows R. This
file is:
src/extra/blas/Makefile.win
The name of the BLAS library file--something like
openblas_haswellp-r0.2.20--needs to replace the currently existing
references. Note that the lib that starts the file and the .a extension
are expected by the compiler and so the makefile should only need all the
characters after the lib and before the .a
LaTeX is required for the build to complete. I've used MiKTeX Portable only
because its easy to download and install. The LaTeX bin directory needs to be
added to the PATH. MiKTeX also must download smörgåsbord of extra packages--
and must do so without user interaction. There's a initexmf command
which can help set that up.
Additionally, QPDF is needed for processing some of the completed PDFs. The location of the install can be specified in the environment variables as part of the installation. QPDF is auto-downloaded from its GitHub releases page.
A compatible openblas library is required. You can make your own--and compile for a processor other than Intel's Haswell family using the openblasr project. A Haswell library is provided in this build for simpolicity. If you want to download the openblasr file, you may do so here:
https://ci.appveyor.com/project/thequackdaddy/openblasr
Pick the most recent build that succeeded and select the Artifact tab to download it.
Please note that it is important to set the PATH so that the Rtools gcc
compiler and make will be found before any other installation on the system.
Additionally, pdflatex.exe needs to be in the path. MiKTeX needs
a few additional packages to install everything, so be sure to either download
them or configure MiKTeX so that dependencies are auto-downloaded and
installed.
A compiled 64-bit R, with OpenBLAS compiled for Intel Core i7 processors is available here:
https://github.com/thequackdaddy/R-OpenBLAS/releases
Select the most recent successful build and download the executable artifact.
cd r-source git checkout -t origin/tags/<version number> cd .. git add r-source git commit -m "Updated OpenBLAS" git push origin <branchname>