S2I SciPy Notebook

Deprecated

NOTE: This repo is no longer maintained, we would be using the s2i-generic-data-science-notebook repository to provide similar notebook image going further.
Please use the repo s2i-generic-data-science-notebook for issues and requests.

Custom Notebook built with Thoth s2i-minimal-notebook.

This custom notebook contains SciPy related packages install with minimal notebook for Data Science usage. This image can be directly used if user needed these package while using the minimal jupyter notebook.

This repository is created from Graham Dumpleton: jupyter-on-openshift/jupyter-notebooks.

We have configured this repository to used pipenv and micropipenv python dependency managers.

List of packages in scipy-notebook

- beautifulsoup4
- bokeh
- cloudpickle
- cython
- dask
- dill
- distributed
- h5py
- ipywidgets
- matplotlib
- pandas
- plotly
- pyarrow
- s3fs
- scikit-image
- scikit-learn
- scipy
- seaborn
- sqlalchemy
- statsmodels

List of extensions

- jupyter-bokeh

Importing the SciPy Notebook

A pre-built version of the scipy notebook based on Thoth s2i-minimal-notebook, can be found at quay.io:

https://quay.io/repository/thoth-station/s2i-scipy-notebook

This image could be imported into an OpenShift cluster using OpenShift ImageStream:

apiVersion: image.openshift.io/v1
kind: ImageStream
metadata:
  # (Below label is needed for Opendatahub.io/JupyterHub)
  # labels:
  #   opendatahub.io/notebook-image: "true"
  name: s2i-scipy-notebook
spec:
  lookupPolicy:
    local: true
  tags:
  - name: latest
    from:
      kind: DockerImage
      name: quay.io/thoth-station/s2i-scipy-notebook:latest

Building the Minimal Notebook

Instead of using the pre-built version of the minimal notebook, you can build the minimal notebook from source code.

With Thoth advise

s2i build . quay.io/thoth-station/s2i-minimal-notebook:latest \
--env ENABLE_PIPENV=1 \
--env THOTH_ADVISE=1 \
--env THOTH_DRY_RUN=0 \
--env THOTH_PROVENANCE_CHECK=1 \
s2i-scipy-notebook

Without Thoth advise

s2i build . quay.io/thoth-station/s2i-minimal-notebook:latest \
--env ENABLE_PIPENV=1 \
--env THOTH_ADVISE=0 \
--env THOTH_ERROR_FALLBACK=1 \
--env THOTH_DRY_RUN=1 \
--env THOTH_PROVENANCE_CHECK=0 \
s2i-scipy-notebook