tianrenmao
Research field: Environmental Microbiology, Microbial Genomics, animal genomic sequencing, NGS sequencing and analysis, Oxford Nanopore sequencing and analysis.
UNIVERSITY OF OKLAHOMANorman, OK
Pinned Repositories
16S-18S-ITS-ASAP
This is an automatic pipeline for analysis of amplicon sequence data including 16S, 18S and ITS. It wraps QIIME commands and complements them with additional analysis where QIIME is not good at, such as combine multiple sequencing runs, OTU clustering and chimeric removal with UP ARSE, alignment filtering with Gblock, removing Chloroplast sequences.
asap
Amplicon Sequence Analysis Pipeline (ASAP)This is an automatic pipeline for analysis of amplicon sequence data including 16S, 18S and ITS.
Assistant-for-paper-reading-and-manuscript-writing
Don’t want to be lost in the sea of information when reading or writing? Try RWA!
tianrenmao's Repositories
tianrenmao/16S-18S-ITS-ASAP
This is an automatic pipeline for analysis of amplicon sequence data including 16S, 18S and ITS. It wraps QIIME commands and complements them with additional analysis where QIIME is not good at, such as combine multiple sequencing runs, OTU clustering and chimeric removal with UP ARSE, alignment filtering with Gblock, removing Chloroplast sequences.
tianrenmao/Assistant-for-paper-reading-and-manuscript-writing
Don’t want to be lost in the sea of information when reading or writing? Try RWA!
tianrenmao/asap
Amplicon Sequence Analysis Pipeline (ASAP)This is an automatic pipeline for analysis of amplicon sequence data including 16S, 18S and ITS.