/higlass

Fast contact matrix visualization for the web.

Primary LanguageJavaScriptMIT LicenseMIT

Introduction

HiGlass is a web-based viewer for genome interaction maps featuring synchronized navigation of multiple views as well as continuous zooming and panning for navigation across genomic loci and resolutions. It supports visual comparison of Hi-C and other genomic data from different experimental conditions and can be used to efficiently identify salient outcomes of experimental perturbations, generate new hypotheses, and share the results with the community.

A live instance can be found at http://higlass.io. A Docker container is available.

For documentation about how to use and install HiGlass, please see the wiki.

Example

Development

To run higlass from its source code simply run the following:

npm install
npm run start