tillahoffmann
Building network models at @HarvardChanSchool with a focus on open and reproducible science. Formerly @imperial, @spotify.
Harvard T.H. Chan School of Public HealthBoston, MA
tillahoffmann's Stars
tensorflow/tensorflow
An Open Source Machine Learning Framework for Everyone
jupyterlab/jupyterlab
JupyterLab computational environment.
sqlite/sqlite
Official Git mirror of the SQLite source tree
pydoit/doit
CLI task management & automation tool
obsidianmd/obsidian-api
Type definitions for the latest Obsidian API.
testcontainers/testcontainers-python
Testcontainers is a Python library that providing a friendly API to run Docker container. It is designed to create runtime environment to use during your automatic tests.
patrick-kidger/torchtyping
Type annotations and dynamic checking for a tensor's shape, dtype, names, etc.
stan-dev/math
The Stan Math Library is a C++ template library for automatic differentiation of any order using forward, reverse, and mixed modes. It includes a range of built-in functions for probabilistic modeling, linear algebra, and equation solving.
pydata/sparse
Sparse multi-dimensional arrays for the PyData ecosystem
tillahoffmann/obsidian-jupyter
stan-dev/cmdstan
CmdStan, the command line interface to Stan
citation-style-language/schema
Citation Style Language schema
stan-dev/cmdstanpy
CmdStanPy is a lightweight interface to Stan for Python users which provides the necessary objects and functions to compile a Stan program and fit the model to data using CmdStan.
katchsvartanian/voiceRecognition
Project uses Google Speech API to transcript sound files(.flac) and play the sound files
mgaitan/pytest-line-profiler
Profile code executed by pytest, line by line.
rsnirwan/HouseholderBPCA
Rotation Invariant Householder Parameterization for Bayesian PCA
simulation-based-inference/simulation-based-inference.github.io
Website
tillahoffmann/universal_tensorflow_image
Develop tensorflow models with or without a GPU accelerator using the same Docker image. š„³
tillahoffmann/shedding
Uncertainties surrounding the concentration of viral RNA fragments in the faeces of individuals infected with SARS-CoV-2 poses a major challenge for wastewater-based surveillance of Covid-19. This repository serves to collate data from quantitative studies on RNA load in faecal samples to constrain the shedding distribution.
tillahoffmann/wastewater-catchment-areas
7,537 wastewater catchment areas in the Great Britain covering more than 95% of the population.
tillahoffmann/cyfunc
Easy universal functions for numpy in cython.
shedding-hub/shedding-hub
Data and statistical models for biomarker shedding.
tillahoffmann/ifnt
Execute runtime assertions, indexing checks, and more if `jax` code is not traced.
tillahoffmann/template
A simple template for reproducible research.
tillahoffmann/version-wizard