Pinned Repositories
alignment-and-variant-calling-tutorial
basic walk-throughs for alignment and variant calling from NGS sequencing data
asremlParallel
ASreml R-wrapper
bioinf_tools
Small scripts for working with sequence data at CIGENE
geno_imputation
Documentation and code base for the Geno/Roslin imputation project
gg.ldplot
Plot a pairwise LD matrix from vcftools with ggplot2.
gg.manhattan
Make manhattan plots with ggplot2.
lipid-notes
r_workshops
Repository for the CIGENE R workshops.
timknut's Repositories
timknut/gg.manhattan
Make manhattan plots with ggplot2.
timknut/geno_imputation
Documentation and code base for the Geno/Roslin imputation project
timknut/gg.ldplot
Plot a pairwise LD matrix from vcftools with ggplot2.
timknut/asremlParallel
ASreml R-wrapper
timknut/bioinf_tools
Small scripts for working with sequence data at CIGENE
timknut/lipid-notes
timknut/r_workshops
Repository for the CIGENE R workshops.
timknut/alignment-and-variant-calling-tutorial
basic walk-throughs for alignment and variant calling from NGS sequencing data
timknut/annotables
R data package for annotating/converting Gene IDs
timknut/breakdancer
SV detection from paired end reads mapping
timknut/cluster_pipelines
timknut/courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
timknut/datasharing
The Leek group guide to data sharing
timknut/dotfiles
dotfiles
timknut/impute_to_Sequence
Code base for the Bovine "impute to sequence" project at Cigene.
timknut/knitr-examples
a collection of knitr examples
timknut/LMM_explained
timknut/odbc
Connect to ODBC databases (using the DBI interface)
timknut/oneliners
Useful bash one-liners for bioinformatics.
timknut/penncnvklubben
timknut/qqman
R code for creating Manhattan plots and Q-Q plots for GWAS
timknut/r4ds
R for data science
timknut/reviews
Writing reviews of academic papers
timknut/rustadporten
Barnehage
timknut/shiny-examples
timknut/SlurmTemp
Automatically create and send slurm scripts to the Cigene cluster.
timknut/snpfix
Scripts to report from and make changes to SNP-files
timknut/test_image_render
timknut/timknut.github.io
repository for http://timknut.github.io