Pinned Repositories
timosachsenberg's Repositories
timosachsenberg/OpenMS
The codebase of the OpenMS project
timosachsenberg/AutoRT
AutoRT: Peptide retention time prediction using deep learning
timosachsenberg/autowrap-feedstock
A conda-smithy repository for autowrap.
timosachsenberg/Awesome-Learning-with-Label-Noise
A curated list of resources for Learning with Noisy Labels
timosachsenberg/Bachelor-Thesis
My bachelor thesis on "Semi-supervised learning for nucleic acid cross-linking mass spectrometry".
timosachsenberg/bioconda-recipes
Conda recipes for the bioconda channel.
timosachsenberg/container-pwiz
The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis, developed by the Proteowizard Team at http://proteowizard.sourceforge.net/. This repository contains the Docker image to convert from many vendor raw data formats to mzML via Linux WINE.
timosachsenberg/containers-rules-manuscript
Recommendations to contenarized your bioinformatics software
timosachsenberg/contrib
The OpenMS contrib libraries
timosachsenberg/cpp_code_snippets
Advanced C++ By Example course. Currently in developemnt.
timosachsenberg/CTDopts
Gives your command-line tools a CTD-compatible interface
timosachsenberg/DiaNN
DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data
timosachsenberg/DivideMix
Code for paper: DivideMix: Learning with Noisy Labels as Semi-supervised Learning
timosachsenberg/dlomix-resources
timosachsenberg/dockerfiles
This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.
timosachsenberg/GoogleSummerOfCode2018
timosachsenberg/GSoC
OBF Google Summer of Code
timosachsenberg/iwc
Intergalactic Workflow Commission
timosachsenberg/ML4ProtID
timosachsenberg/mzTab
mzTab Reporting MS-based Proteomics and Metabolomics Results
timosachsenberg/PeptideProphetLibrary
Runs the PeptideProphet algorithm against SEQUEST _syn.txt files
timosachsenberg/proteomics-metadata-standard
The Proteomics Experimental Design file format: Standard for experimental design annotation
timosachsenberg/psi-ms-CV
HUPO-PSI mass spectrometry CV
timosachsenberg/pyopenmspandas
Improve integration of pyopenms with pandas
timosachsenberg/scPROTEIN
timosachsenberg/sl-nuxl
Streamlit repository for NuXL
timosachsenberg/Softwareprojekt_Daum_Huber_Janns
Softwareprojekt_2018
timosachsenberg/specpride
Analysis of different consensus spectrum construction methods
timosachsenberg/TeamProjekt-PyQt5
timosachsenberg/Teamprojekt_Justus_Thomas_Mathis