/Py_deseq2_normalization

This function will take as input pandas dataframe and perform DESeq2-like normalization of input abundances

Primary LanguagePython

Py_deseq2_normalization

Deseq2-like normalization in Python.

Known as Median of ratios transformation.

This function will take as input pandas dataframe (features/functions as rows and samples as columns) with counts and perform DESeq2-like normalization.

Usage: copy it in your python3 script and call it when necessary.