Pinned Repositories
dl-biodb
Repo for work surrounding downloadable biological databases
filter_contigs
Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.
header_renamer
Rename FASTQ headers into a fake Illumina format.
log_verbosity
Recipe for controlling log level via argparse and Python
spades_stats
sra_exp
Short script to lookup SRA Experiment accessions from SRA Run accessions
tinybio's Repositories
tinybio/filter_contigs
Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.
tinybio/dl-biodb
Repo for work surrounding downloadable biological databases
tinybio/log_verbosity
Recipe for controlling log level via argparse and Python
tinybio/sra_exp
Short script to lookup SRA Experiment accessions from SRA Run accessions
tinybio/header_renamer
Rename FASTQ headers into a fake Illumina format.
tinybio/spades_stats