Pinned Repositories
bigdataviewer-bioformats
Opens bioformat images in BigDataViewer
cellprofiler-practical-NeuBIAS-Lisbon-2017
DEPRECATED-fiji-plugin-elastixWrapper
fiji-correct-3d-drift
fiji-plugin-imageRegistration
Plugin for registration of 5D image data.
fiji-plugin-multiModalDataViewer
fiji-script-registrationUsingElastix
HTM_Explorer
Inspection and statistical analysis of high throughput microscopy data
segmentation-annotator
tischi's Repositories
tischi/cellprofiler-practical-NeuBIAS-Lisbon-2017
tischi/segmentation-annotator
tischi/fiji-correct-3d-drift
tischi/fiji-plugin-multiModalDataViewer
tischi/bigdataviewer-bioformats
Opens bioformat images in BigDataViewer
tischi/mcib3d-plugins
ImageJ plugins for 3D processing and analysis
tischi/nextflow-examples
tischi/bigdataviewer-biop-tools
Another repo for bdv tools.
tischi/bigdataviewer-core
ImgLib2-based viewer for registered SPIM stacks and more
tischi/bigdataviewer-spimdata-extras
Extra settings that can be stored in spimdata file format
tischi/bigdataviewer_fiji
Fiji plugins for starting BigDataViewer and exporting data.
tischi/EasyXT-FIJI
Commands and Classes for interfacing between Imaris and Fiji
tischi/fiji-plugin-em-tomogram-matching
tischi/fiji-plugin-morphometry
tischi/fiji-plugin-template
tischi/fiji-plugin-yaml-metadata
tischi/hot-knife
tischi/i2k-2020-s3-zarr-workshop
tischi/ilastik4ij
ImageJ plugins to run ilastik workflows
tischi/imagej-net-static
Final version of MediaWiki imagej.net
tischi/imglib2-roi
Regions of interest (ROIs) and labelings for ImgLib2
tischi/list-of-update-sites
The update sites ImageJ knows about automatically
tischi/MorphoLibJ
Collection of mathematical morphology methods and plugins for ImageJ
tischi/n5
Not HDF5
tischi/n5-zarr
Zarr filesystem backend for N5
tischi/pom-scijava
Friendly base POM for all SciJava-based software
tischi/scijava-common
A plugin framework and application container with built-in extensibility mechanism :electric_plug:
tischi/scijava-ui-swing
SciJava UI components for Java Swing.
tischi/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
tischi/TrackMate
TrackMate is your buddy for your everyday tracking.