Translational NeuroEngineering Laboratory
Developing technologies to reverse the effects of mental illness.
Minneapolis, MN
Pinned Repositories
Coherence-Spectrogram-Viewer
This plugin plots Coherence and Spectrogram (power vs Frequency).
crossing-detector
Plugin to detect when signals rise or fall across thresholds, for the Open Ephys GUI.
ica-plugin
Open Ephys plugin to do ICA decomposition of LFP data and remove selected components.
Jansen-Rit-model
Basic code for simulation using Jansen Rit 1-node and 2-node models
mean-spike-rate
Plugin for the Open Ephys GUI to estimate an exponentially-weighted recent spike rate over time and channels.
oep-installation
Easy install scripts for Open Ephys GUI with plugins
phase-calculator
Real-time continuous phase estimator for the Open Ephys GUI
plugin-GUI
Open Ephys GUI with plugin architecture
py-behav-box-v2
Pybehave is an open source software interface and framework for controlling behavioral experiments in neuroscience and psychology.
TORTE
Toolkit for Oscillatory Real-Time Tracking and Estimation
Translational NeuroEngineering Laboratory's Repositories
tne-lab/closed-loop-python
Simple code to run TNEL closed loop protocol with Python
tne-lab/closed-loop-stim
LabVIEW program to receive events broadcasted from the Open Ephys GUI and output stimulation pulses with equalized delay
tne-lab/continuous-stats
Plugin for the Open Ephys GUI to compute the exponentially weighted mean or standard deviation of incoming continuous data.
tne-lab/DBSParameterOptimization2022
tne-lab/MSIT-Nature-Biomedical-Engineering
Matlab codes for analysis of MSIT LFP datasets collected at MGH/BWI
tne-lab/neuralynx-plugin
Public front for the neuralynx-plugin for Open Ephys GUI.
tne-lab/py-behav-box
Open Source Behavior Controller for Rodent Models
tne-lab/real-time-ERP
Open Ephys Plugin to visual and calculate real time evoked potentials.
tne-lab/ica-plugin
Open Ephys plugin to do ICA decomposition of LFP data and remove selected components.
tne-lab/WebsurfAnalysis
Processing and analysis scripts for COMPAS derived Websurf data
tne-lab/addiction-pybehave
tne-lab/Craniobot
tne-lab/flexibility-pybehave
tne-lab/Headstage-accelerometry-paper-2022
tne-lab/KWIKFormat
A plugin to record to and read from files based on the KWIK specification
tne-lab/logic-gate-plugin
Open Ephys plugin to combine TTL signals with logic operators
tne-lab/NWBFormat
A format to record to files based on the Neurodata Without Borders 1.0 specification
tne-lab/Olsen-et-al-2020
tne-lab/open-ephys-python-tools
Python code for interacting with the Open Ephys GUI
tne-lab/OpenEphysFFTW
FFTW (Fourier transform) wrapper, using RAII, for use in Open Ephys (or other JUCE-based aplications)
tne-lab/OpenEphysHDF5Lib
A common library for all formats that write HDF5 files
tne-lab/PythonPlugin
A plugin for open-ephys enabling the insertion of Cython into the open-ephys signal chain.
tne-lab/range-check
Plugin for Open Ephys to check if a channel is between a user specified range.
tne-lab/sample-math
Plugin for the Open Ephys GUI to perform simple samplewise arithmetic on continuous channels
tne-lab/song-pybehave
tne-lab/song-tasks
tne-lab/spikes
cortex lab code for electrophysiology
tne-lab/tbi-pybehave
tne-lab/TNEL-Python-Pipeline
Pipeline to load in neural data from Open Ephys in Python.
tne-lab/Widge-Tractography-2021