tokjun
A research scientist at Brigham and Women's Hospital specialized in image-guided interventions.
Brigham and Women's HospitalBoston, MA
Pinned Repositories
AblationMarginVisualizer
3D Slicer scripted module to evaluate ablation margin using segmented tumor and ablation volume data
AblationPlanner
3D Slicer module to estimate ablation volume on 3D image (based on a ellipsoidal model)
DICOMIGTL
DICOM-OpenIGTLink Server
ELTemplate
PhaseUnwrapping
Phase unwrapping module
RegistrationUtilities
Utility modules for 3D Slicer image registration
ros2_igtl_bridge
OpenIGTLink bridge node for ROS2
SlicerPointCloud
Slicer module to visualize point cloud in 3D Slicer (Experimental
SlicerPointCloudTest
Point cloud demo for 3D Slicer
tokjun's Repositories
tokjun/ros2_igtl_bridge
OpenIGTLink bridge node for ROS2
tokjun/aigt
Deep learning software modules for image-guided medical procedures
tokjun/CryoAnalysisScripts
tokjun/diagramtest
tokjun/dicom_igtl_bridge
Export DICOM images to OpenIGTLink clients
tokjun/docker-ros2-igtl
A Docker image to provide web VNC interface to access Ubuntu LXDE/LxQT desktop environment.
tokjun/EvaluationScripts
Python/R/Shell scripts for evaluation
tokjun/IGTLRepeater
A bridge to relay OpenIGTLink messages between two hosts for debugging.
tokjun/IGTLTrackingDataTest
tokjun/IntensitySamplingUtilities
Python scripts to analyze image intensities.
tokjun/MiscScripts
tokjun/MRCatheterTrackingSim
Tracking Simulator Client
tokjun/MRISegmentation
AI-based Iceball segmentation for MRI-guided cryoablation
tokjun/MRThermometry
MR-based Thermometry module for 3D Slicer
tokjun/MRTracking
Slicer Module for MR tracking experiment.
tokjun/my_bot
Template for a ROS package
tokjun/NeedleSegmenter
NeedleSegmenter module in 3Dslicer
tokjun/OpenIGTLink
Free, open-source network communication library for image-guided therapy
tokjun/OpenIGTLinkIO
Library for interfacing to openigtlink/OpenIGTLink, dependent on VTK and Qt. Based on openigtlink/OpenIGTLinkIF
tokjun/ROS-IGTL-Bridge
ROS node to exchange data between ROS and medical image computing software using the OpenIGTLink protocol.
tokjun/rosmed.github.io
tokjun/Slicer-OpenSSL
OpenSSL sources and builds used in Slicer-based projects.
tokjun/slicer_ros2_module
Slicer module that can interface directly with ROS 2 using ROS parameters, topics, tf...
tokjun/SlicerCryoablationMonitoring
tokjun/SlicerForCASTutorial
Tutorial materials for Seminar at BMPE Lab., University of Tokyo.
tokjun/SlicerOpenIGTLink
OpenIGTLinkIF module as an Slicer Extension
tokjun/SlicerProstateAblation
SlicerProstateAblation is a 3D Slicer extension designed to support the workflow of the in-bore MRI-guided therapies. SlicerProstateAblation was developed and tested to support transperineal prostate ablation procedures in the Advanced Multimodality Image Guided Operating (AMIGO) at the Brigham and Women's Hospital, Boston. Its applicability to other types of procedures has not been evaluated.
tokjun/smart_template_description
tokjun/SystemIntegration
tokjun/tokjun.github.com
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