tommyfuu
Computational biologist or bio-enthusiastic computer scientist?
Memorial Sloan Kettering Cancer Center/Weill Cornell MedicineNew York, NY
tommyfuu's Stars
shap/shap
A game theoretic approach to explain the output of any machine learning model.
ekzhang/sshx
Fast, collaborative live terminal sharing over the web
lucidrains/x-transformers
A concise but complete full-attention transformer with a set of promising experimental features from various papers
MIT-LCP/mimic-code
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
hila-chefer/Transformer-Explainability
[CVPR 2021] Official PyTorch implementation for Transformer Interpretability Beyond Attention Visualization, a novel method to visualize classifications by Transformer based networks.
lucidrains/alphafold3-pytorch
Implementation of Alphafold 3 from Google Deepmind in Pytorch
Ma-Lab-Berkeley/CRATE
Code for CRATE (Coding RAte reduction TransformEr).
Pseudomanifold/latex-mimosis
A minimal & modern LaTeX template for your (bachelor's | master's | doctoral) thesis
kmkurn/pytorch-crf
(Linear-chain) Conditional random field in PyTorch.
hila-chefer/Transformer-MM-Explainability
[ICCV 2021- Oral] Official PyTorch implementation for Generic Attention-model Explainability for Interpreting Bi-Modal and Encoder-Decoder Transformers, a novel method to visualize any Transformer-based network. Including examples for DETR, VQA.
slaypni/fastdtw
A Python implementation of FastDTW
yrosseel/lavaan
an R package for structural equation modeling and more
taesiri/ArXivQA
WIP - Automated Question Answering for ArXiv Papers with Large Language Models (https://arxiv.taesiri.xyz/)
GenomicSEM/GenomicSEM
R-package for structural equation modeling based on GWAS summary data
irinagain/Awesome-CGM
List of CGM datasets
Navidfoumani/ConvTran
This is a PyTorch implementation of ConvTran
reml-lab/mTAN
Code for "Multi-Time Attention Networks for Irregularly Sampled Time Series", ICLR 2021.
BorgwardtLab/Set_Functions_for_Time_Series
Repository of the ICML 2020 paper "Set Functions for Time Series"
mlds-lab/interp-net
Code for "Interpolation-Prediction Networks for Irregularly Sampled Time Series", ICLR 2019.
ZhouYuxuanYX/Hyperformer
This is the official implementation of our paper "Hypergraph Transformer for Skeleton-based Action Recognition."
rondolab/MR-PRESSO
Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.
BrunakSanderLabs/CancerRiskNet
philipdarke/torchtime
Benchmark time series data sets for PyTorch
ritaranx/CACHE
[ML4H 2022] This is the code for our paper `Counterfactual and Factual Reasoning over Hypergraphs for Interpretable Clinical Predictions on EHR'.
alistairewj/challenge2012
Python code parsing data from PhysioNet Challenge 2012
dgarrimar/manta
Non-parametric, asymptotic P-value computation for multivariate linear models
euxhenh/Truffle
Trajectory Inference of clinical data via Multi-commodity Flow
clinical-data-mining/msk_cdm
Prototype for new CDM repo layout
jennylsl/MicroBNetwork
MicroBNetwork is a a computationally efficient and statistically powerful methods for microbial network analyses: Hubs, Multiple Conditions, and Complex Design.
mhmondol/geefirthr