tonyreina
Head of Machine Learning working in biotechnology at biotech startup.
Biotech StartupLa Jolla, CA
Pinned Repositories
antibody-affinity
Antibody affinity modeling
chemistry
Using TensorFlow to model chemistry problems
mlt
ML Container Templates
python_for_poets
Introduction to Python tutorials
retrosynthesis
Chemistry retrosynthesis modeling
tdc-tcr-epitope-antibody-binding
Example notebook for creating a deep learning model to predict if a T-cell receptor (TCR) and protein epitope will bind to each other
tonyreina's Repositories
tonyreina/chemistry
Using TensorFlow to model chemistry problems
tonyreina/antibody-affinity
Antibody affinity modeling
tonyreina/python_for_poets
Introduction to Python tutorials
tonyreina/tdc-tcr-epitope-antibody-binding
Example notebook for creating a deep learning model to predict if a T-cell receptor (TCR) and protein epitope will bind to each other
tonyreina/retrosynthesis
Chemistry retrosynthesis modeling
tonyreina/unet-broad-nuclei
A 2D U-Net to segment nuclei from images of cells. The dataset is from the Broad Bioimaging Benchmark Collection (https://bbbc.broadinstitute.org/BBBC038).
tonyreina/zincbind2
Zinc bind
tonyreina/AAV-Triple-Transfection-Mechanistic-Model
Mechanistic model for AAV viral vector production via triple transfection. Published June 15th 2021
tonyreina/bci_eeg
tonyreina/bioconda-recipes
Conda recipes for the bioconda channel.
tonyreina/cld_docker
Docker for CRISPR Library Designer | https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0915-2
tonyreina/convolution
Convolutional figures
tonyreina/CRISPResso
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
tonyreina/dash-sample-apps
Open-source demos hosted on Dash Gallery
tonyreina/Docker
tonyreina/histology
Histology TensorFlow Demo
tonyreina/jupyter-dash
Develop Dash apps in the Jupyter Notebook and JupyterLab
tonyreina/keras_tutorials
Keras Tutorials
tonyreina/mol2vec
Mol2vec - an unsupervised machine learning approach to learn vector representations of molecular substructures
tonyreina/OpenFederatedLearning
tonyreina/openfl
An open framework for Federated Learning.
tonyreina/openvino
OpenVINO™ Toolkit repository
tonyreina/POT_tutorial
OpenVINO Post-Training Optimization Toolkit Tutorial
tonyreina/scikit-image
Image processing in Python
tonyreina/training
Reference implementations of training benchmarks
tonyreina/TRILL
Sandbox for Deep-Learning based Computational Protein Design
tonyreina/upenn
Code for running TensorFlow on UPenn submission system.
tonyreina/zincbindpredict
Zinc Bind Prediction based on https://github.com/samirelanduk/ZincBindPredict
tonyreina/ZincBindPredict-1
Predictive models of zinc binding
tonyreina/zincfingers