afni
There are 20 repositories under afni topic.
robertoostenveld/bids-tools
Tools for dealing with neuroimaging data in the BIDS structure
Macatools/macapype
PNH segmentation pipelines based on nipype
weikanggong/Resting-state-fMRI-preprocessing
A Matlab-based software package for preprocessing the resting-state fMRI data
rystoli/afniGLMprep
afniGLMprep is python code which prepares and runs GLMs on neuroimaging data stored in the BIDS format (http://bids.neuroimaging.io/). This is done via AFNI's 3dDeconvolve function.
LabNeuroCogDevel/LNCDR
Convenience functions for the LNCD. Includes db query, data processing, modeling, and visualizing
muschellij2/afnir
Wrapper Functions for 'AFNI' software in R
tommysprague/preproc_shFiles
Prisma preprocessing (AFNI)
bjw34032/oro.nifti
Functions for the input/output and visualization of medical imaging data that follow either the ANALYZE, NIfTI or AFNI formats.
omerferhatt/bold-fmri-img-processing
Preprocessing fMRI scans, localizing the brain area that processes faces.
wmotte/ocd
Scripts to process preclinical obsessive compulsive disorder data
afni/Staff_scientist_position_available
job advert **not currently on offer**
award7/asl_analysis_pipeline
Various scripts (Bash, Matlab, Python) for processing ASL MRI data using AFNI, SPM, and FSL.
jorennig/fMRI_Analysis_AFNI_Unix_Matlab
Pipeline to analyze fMRI data with AFNI
p3proc/p3
An extensible fMRI Preprocessing Pipeline in nipype based on a 2015 Jonathan Power Pipeline
vnbcs/app-QWarp
runs AFNI's 3dQwarp function over a NIfTI file
aaroneg/Install-AFNI-on-Ubuntu-on-Windows
batch scripts to install afni, tailored to the process for installing in ubuntu on windows subsystem for linux.
anibalsolon/app-reho
BrainLife.io Regional Homogeneity app
sebastientourbier/connectomemapper-ubuntu16.04
Docker image that provides a Ubuntu 16.04 (Xenial) with all CMP pre-requisite software installed