amino-acids
There are 57 repositories under amino-acids topic.
PeptoneLtd/dspp-keras
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
CSBiology/BioFSharp
Open source bioinformatics and computational biology toolbox written in F#.
tadorfer/protlearn
A Python package for extracting protein sequence features
sarisabban/RamaNet
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
debbiemarkslab/EVzoom
Visually explore covariation in protein families
BioJulia/BioSymbols.jl
Nucleic and amino acid primitive types
gph82/mdciao
mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data
WesleyyC/Amino-Acid-Embedding
:microscope: Train an Amino Acid Embeddings (or a dragon?)
sarisabban/Pose
A bare metal Python library for building and manipulating protein molecular structures
HussainAther/dnapacman
waka waka
whitehead/plaac
Prion-Like Amino Acid Composition
allydunham/aa_subtypes
Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape
ronak-07/Divisive-Hierarchical-Clustering
In Divisive we have all points in one cluster initially and we break the cluster into required number of clusters.
StollLab/chiLife
Python package for site-directed spin labeling of proteins
StanIsAdmin/PyProt
A set of libraries for aligning, profiling, and predicting the structure of proteins
0xF6/Genome
🧬🦠🧪 [research][wip] Library for working with DNA, RNA, and etc acids
doctorbetaq/SimpleBio.jl
Easy-to-use biological sequence tools working with DNA, RNA and aminoacid sequences.
richelbilderbeek/AminoAcidFighter
Game in which amino acids do battle, written in C++ using Qt
Rav4s/DNA_transcription_translation
A simple, fast program which transcribes a DNA strand into messenger RNA (mRNA), which it then translates into amino acids.
Rav4s/wasm-dna-transcription-translation
DNA transcription and translation in wasm with rust
wbrickner/genonym
Interspecies protein translator + translation optimizer
ghattab/amino-acids-card-game
An open-source mnemonic card game for amino acids (aa). It essentially relies on a simplified molecular representation, redundant visual encoding, emphasis, and de-emphasis of molecular parts.
massie/chipper
Fast proteasomal cleavage detection. Apache-licensed.
mgfzemor/Pairwise-sequence-Aligment-Tool
Pairwise Sequence Aligment Tool (PSAT) a simple application to align sequences.
apple-phi/thtools
A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
forrestbicker/CoarseGrainScripts
A Generalized Algorithm for Coarse-Graining Molecular Dynamics Simulations with Boltzmann parametrization
gkoulouras/seq-sec-ratio
A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
mishaploid/AA-GenomicPrediction
Genomic prediction of amino acid traits in Arabidopsis seeds
Rav4s/Rust_DNA_transcription_translation
A simple, fast program which transcribes a DNA strand into messenger RNA (mRNA), which it then translates into amino acids, implemented in Rust.
zenodeapp/pairwise-alignments
Solidity implementations of well-known pairwise alignment methods such as Needleman-Wunsch's global sequence alignment and the Smith-Waterman local sequence alignment algorithm.
jeanmanguy/amino-acids
Suite of Rust crates related to amino acids.
balazshorvathreal/MegaVir
MegaVir is a bioinformatic pipeline for virome characterization and genome assembly.
hkabbech/AA_inventory
Inventory of amino acids present on the surface of peripheral proteins of a same family
myon-bioinformatics/search_seq_including_spaces
Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)
NutrientInstitute/protein-quality-hub
Protein Quality Hub
pritindra/PyPep_Toolbox
A set of tools for different calculation of sequences of peptide, dna, rna, etc.