antibodies

There are 20 repositories under antibodies topic.

  • oxpig/AbLang

    AbLang: A language model for antibodies

    Language:Python1283924

  • xinyu-dev/annotate_v

    Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python

    Language:Jupyter Notebook28124

  • bayer-science-for-a-better-life/topefind-public

    Finding the pitfalls of deep learning predictors of interacting residues in antibodies šŸ¦ 

    Language:Python22440

  • epiverse-trace/serofoi

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    Language:R174914

  • TobiasHeOl/AbLang

    AbLang: A language model for antibodies

    Language:Python16261

  • Bdegraaf1234/FabLab

    Integrated LC-MS/MS-based de novo sequencing of antibody chains in complex mixtures

    Language:C#4100

  • DABAKER165/pepMeld

    Peptide Microarray Workflow. Python, open-source

    Language:Python4211

  • FabianTraxler/ag_binding_affinity

    Code repository for Master Thesis "Antibody-antigen binding affinity prediction through the use of geometric deep learning"

    Language:Jupyter Notebook4440

  • seroanalytics/serosim

    An R package for simulating serosurvey data using custom models for the data-generating process

    Language:R4413

  • tAndreani/scBCR

    Benchmarking computational methods for B cell receptor reconstruction from single cell RNA-seq data

    Language:R4261

  • lin-justin/cafe

    Classifying Antibodies for Expression

    Language:Python2200

  • msuprun/bbeaR

    An R package and framework for epitope-specific antibody profiling for the data obtained with the Bead-Based Epitope Assay (BBEA)

    Language:R2202

  • xinyu-dev/hopp-woods

    Prediction of hydrophilicity & antigenic determinants from protein sequences

    Language:Jupyter Notebook2100

  • ahmedaq/HCV-E2

    Software for in silico identification of immunologically-vulnerable regions of the HCV E2 glycoprotein and broadly neutralizing antibodies that target them

    Language:MATLAB1103

  • i6092467/t-cells-response-sars-cov-2

    Code and data for the ML analysis of humoral and cellular responses to SARS-CoV-2

    Language:Jupyter Notebook1100

  • cembrowskilab/proteinsearch.py

    An automated web search for human antibodies labelling neurons and glia in the brain. Takes the direct output of Seurat's "FindMarkers()" and returns a data frame of antibodies based on information from the human protein atlas.

    Language:Python0000

  • icghita/ANNAVP

    Learning the Relationship between the Primary Structure of HIV Envelope Glycoproteins and Neutralization Activity of Particular Antibodies by Using Artiļ¬cial Neural Networks

    Language:MATLAB0000

  • mvboven/cmv-serology

    data and scripts of CMV cross-sectional serological study

    Language:Mathematica0301

  • ZarnitsynaLab/ArielNikas-HumoralMemoryEnhancingInfection

    Code and data associated with the paper 'When does humoral memory enhance infection?' to be published in Plos Computational Biology

    0000
  • mab-libs

    wjs20/mab-libs

    Working with in-silico antibody libraries

    Language:Python10