bacterial-database

There are 8 repositories under bacterial-database topic.

shenwei356/LexicMap
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
Language:Go95 3 24
jordanlab/stringMLST
Fast k-mer based tool for multi locus sequence typing (MLST)
Language:Python42 8 467
medvir/VirMet
Set of tools for viral metagenomics.
Language:Python13 6 475
TIBHannover/BacDiveR
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
Language:R10 2 9712
NotTheStallion/Computer-vision-in-the-service-of-bacteriology
Computer vision in the service of bacteriology refers to the use of computer algorithms and technology to analyze and interpret images of bacteria for the purpose of identifying and characterizing different types of bacteria.
Language:Jupyter Notebook2 1 01
msysbio/bacterial_growth
a database and an interface for bacterial growth data
Language:Python1 2 103
SimranBansal98/UniqueRepeats_BacterialProteome
Language:Python0 1 01
glickmac/GRAB
Retrieve and create a custom BLAST database by taxonomic search
Language:Python2 0