bioengineering
There are 78 repositories under bioengineering topic.
modenaxe/awesome-biomechanics
A curated, public list of resources for biomechanics and human motion analysis: datasets, processing tools, software for simulation, educational videos, lectures, etc.
bebop/poly
A Go package for engineering organisms.
20n/act
Computational synthetic biology: Predicting DNA edits for bioengineering
modenaxe/3d-muscles
Materials to reproduce the results of our paper about 3D muscle modelling.
reubn/ecg
Portable WiFi Connected IoT ECG Monitor 📈💕
barricklab/ostir
Software for predicting translation initiation rates in bacteria
modenaxe/MuscleParamOptimizer
Scripts and models to optimize musculotendon parameters in musculoskeletal models.
jvrana/Terrarium
Computer-Aided Process Planner (CAPP) for Synthetic Biology Research
meyer-lab/tHMM
A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
ThecoderPinar/nanoDNA-nanoROBOT-simulation
nanoDNA-nanoROBOT-simulation: Open-source Python project for modeling and simulating DNA-based nanorobot behavior. 🧬🤖
lorrandal/eeg-power_variability
Combined study of two biological signals: EEG Power Variability and Middle Cerebral Artery Blood Flow Velocity
NydusOne/gcode-composer
CARE! PROTOTYPE! The gcode composer is a tool to plan experiments with the nydus one open source bioprinter.
plasmid-designer/plasmid-designer
Plasmid Designer and DNA Editor
AndrewAGuy/vascular-networks
Procedural Plumbing for Bioengineers
medicamina/ui
Medicamina user interface
Shaumik-Ashraf/BiosystemsProject
A command-line interface and biochemical pathway finder based on KEGG
AnanyaP-WDW/PepEmb
A transformer-based masked language model for learning amino acid sequence representations. The model uses self-attention mechanisms with custom gating and incorporates protein features for enhanced sequence understanding. Trained using BERT-style masking on peptide sequences to learn contextual amino acid embeddings.
Blackfynn/blackfynn-matlab
MATLAB toolbox/client for the Blackfynn platform
J-E-J-S/aaRS-pipeline
A Scalable Pipeline for Discovery of aaRS Mutants to Aid in Genetic Code Expansion.
mattychin/3D-cell-scaffold-generator
Grasshopper algorithm for FRC-inspired scaffold generation.
SamuelLozanoJuarez/CNN_and_Diabetic_Retinopathy
Repository corresponding to the TFG 'Detection of the degree of diabetic retinopathy by means of convolutional networks' of the bachelor's degree in Bioengineering of the University of Burgos.
15-minute-discourse/bioengineered-organs
Associated repository for the "Biofabrication Revolution: Are Lab-Grown Organs the Future of Medicine?" 15 minute discourse podcast on YouTube!
ACRRL/Lab-Description
Applied Control & Robotics Research Laboratory
duecce/ArduinoHRVAnalysis
Development of an embedded system based on Arduino microcontroller to analyse Heart Rate Variability and compute its Fourier transform. The FFT results are sent through the serial port and then read by Matlab, which estimates the Local Power Spectral Density.
imwiththou/PathwayNet
PathwayNet is a project based on Python and Bioinformatics. It tries to build up mathematic modes on simulating pathways of amino acid synthesis in E. coli.
Intergalactic-Mesh-Coalition-IMC/exo-botany-research
Repository for studying extraterrestrial plant life and ecosystems, exploring the potential for agriculture, bioengineering, and terraforming on celestial bodies across the cosmos.
LASER-UD/Pulsomertria-con-MAX30102
En este proyecto se realizara la medición de el porcentaje de saturación de oxígeno de la hemoglobina con el uso del sensor MAX30102, el cual usa el protocolo I2C para su respectiva comunicación, la pila de comunicación se pondra en una libreria, la cual esta inspirada en https://github.com/sparkfun/SparkFun_MAX3010x_Sensor_Library. La lectura del sensor se enviara a un modulo Bluetooth para que se grafique la señal en a un celular con la aplicación Bluetooth Electronic. .
medicamina/medicamina.github.io
Documentation
Rice-University-BMES/Python-Workshops
Introductory Python Workshops! Check out README for more info!
santiagortiiz/Bioengineering-Firmware-29-Datalogger-I2C-Protocol
University of Antioquia. Embedded Systems. Datalogger using I2C protocol with RTC MCP7940 & T[°C] Sensor LM75BD
vedangnarain/polygraph-project
This is a computational framework to analyze raw biological data generated from a polygraph test for the purpose of making psychophysiological inferences.
TrenchSight/WAVE
Real-Time Evolutionary AI Ecosystem for Intelligent Genomics and Bioengineering
andreazedda/bmyLab4DrugDiscovery
This repo contains modules that can be exploited to perform your own drug discovery software
Necas209/Bioengineering-Workshops
Source code for the Bioengineering workshops.