bionano

There are 8 repositories under bionano topic.

AmpliconSuite/AmpliconReconstructorOM
Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
Language:Python16 3 66
HuffordLab/Maize_NC358
The repository for codes developed to generated the Maize NC358 assemblies and analyses.
Language:Jupyter Notebook11 1 04
institut-de-genomique/biscot
Bionano SCaffolding Correction Tool
Language:Python9 5 112
ccneko/OMACASE
an open-source (GPLv3) standalone Python package to analyze optical mapping data, with de novo repeat motif detection and analysis capabilities
Language:Python1 1 00
daaaaande/bionanotator
bionano annovar annotation
Language:Perl0 1 00
laura-budurlean/structural_variant_OGM_WGS_pipeline
A combination of optical genome mapping with Bionano and whole genome sequencing short-read data. This pipeline was created to help integrate structural variant calling from these two technologies.
Language:Shell0 1 00
shada2/Data
Thesis results
Language:Python0 1 00
WestGermanGenomeCenter/BNG_nanotatoR
A human-first SV annotation snakemake pipeline based on nanotatoR working with optical mapping (Bionano Genomics) data
Language:R0 0 00