/BNG_nanotatoR

A human-first SV annotation snakemake pipeline based on nanotatoR working with optical mapping (Bionano Genomics) data

Primary LanguageR

a snakemake workflow for annotation of SVs from Bionano data

need to install:

  • R
    • R-nanotatoR(made through conda)
  • Perl

For now only fors on Linux