bwa
There are 59 repositories under bwa topic.
divonlan/genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
ngless-toolkit/ngless
NGLess: NGS with less work
4dn-dcic/docker-4dn-hic
Docker for 4DN Hi-C processing pipeline
StevenWingett/FastQ-Screen
Detecting contamination in NGS data and multi-species analysis
plmilord/Hass.io-custom-component-spaclient
Home Assistant integration - Spa Client
IARCbioinfo/alignment-nf
Whole Exome/Whole Genome Sequencing alignment pipeline
databricks/genomics-pipelines
secondary analysis pipelines parallelized with apache spark
TRON-Bioinformatics/tronflow-alignment
Nextflow pipeline for BWA, BWA2 and STAR alignments
abs-tudelft/variant-calling-at-scale
Scalable and High Performance Variant Calling on Cluster Environments
jonathanBieler/BurrowsWheelerAligner.jl
Binding for bwa
mnievesc/Ancient_mtDNA_Pipeline
Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.
DKFZ-ODCF/AlignmentAndQCWorkflows
The DKFZ alignment workflow plugin originally developed at the eilslabs
rifkiramadhan/bwa-storegg-server
Ini adalah project Server-Side dari kelas BWA MERN 2021
oskarvid/Selma
Germline Variant Calling Pipeline built in Snakemake
rifkiramadhan/bwa-storegg-client
Ini adalah project Client-Side dari kelas BWA MERN 2021
broadinstitute/gatk-bwamem-jni
JNI code for bwa mem
AntoineHo/runGATK
Small GATK alignment and variant calling pipeline using python
fajar7xx/android-movie-ticket-booking
this is just impelementation from movie ticketing like cinema21, just simple and buat pusing. hahahah.
hewillk/aligner
Highly optimized Burrow-Wheeler Aligner specifically for Illumina ~150 bp short-read alignment.
modupeore/VAP
VAP : For Reference mapping and Variant detection.
tdayris-perso/wes-mapping-bwa-gatk
Map and post-process your bams for SNP calling
wucc009/Platelet_transcriptome_fastq_data_processing
血小板转录组fastq数据处理
celalp/parse_pileup
Parse pileup files, generate consensus fasta and calculate heteroplasmy per nucleotide
colbyford/msgen
msgen: R functions for interfacing with the Microsoft Genomics service on Azure.
crisprVerse/crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
gustaveroussy/wes-snp-bwa-mutect2-annovar
Reference pipeline for somatic SNP detection using BWA for mapping, Mutect2 for calling and Annovar for annotation
jianhong/genomictools
docker file for genomic tools
Moha-cm/RNAseq-Analysis
Bulk Rna-seq Analysis
nuhptr/laravel-code
Learn about laravel
renatopuga/exoma-de-rato
Variantes genéticas de amostras de Rattus norvegicus utilizando GATK4
RRafiee/GenomeAnalysisToolkit
Genome Analysis Toolkit
Syahro/cozy
This app abaut finding a homestay and I use for practice code.
Syahro/game_stream_app
a design apps for play streaming game,