clinical-trials

seandavi/awesome-cancer-variant-databases

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

cqframework/clinical_quality_language

Clinical Quality Language (CQL) is an HL7 specification for the expression of clinical knowledge that can be used within both the Clinical Decision Support (CDS) and Clinical Quality Measurement (CQM) domains. This repository contains complementary tooling in support of that specification.

pharmaverse/admiral

ADaM in R Asset Library

insightsengineering/teal

Exploratory Web Apps for Analyzing Clinical Trial Data

ijmarshall/robotreviewer

Automatic synthesis of RCTs

QuickBirdEng/survey_kit

Flutter library to create beautiful surveys (aligned with ResearchKit on iOS)

futianfan/clinical-trial-outcome-prediction

benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, published in Cell Patterns 2022.

insightsengineering/tern

Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials

RyanWangZf/PyTrial

PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development

opentrials/opentrials

OpenTrials is an app to explore, discover, and submit information on clinical trials.

phoenixctms/ctsms

Phoenix CTMS - the ultimative CTMS/PRS/CDMS.

philbowsher/Open-Source-in-New-Drug-Applications-NDAs-FDA

List of Open-Source in New Drug Applications NDAs FDA

keaven/gsDesign

Group sequential design for clinical trials

rfhb/ctrdata

Aggregate and analyse information on clinical trials from public registers

jvfe/pytrials

Python package that wraps around the ClinicalTrials.gov API

Tian312/EliIE

An information extraction system for free-text eligibility criteria

massimoaria/dimensionsR

Gathering metadata about publications, patents, grants, clinical trials and policy documents from DS Dimensions using DSL API

reliatec-gmbh/LibreClinica

LibreClinica is the community driven successor of OpenClinica. It is an open source clinical trial software for Electronic Data Capture (EDC) Clinical Data Management (CDM).

dermatologist/pyomop

Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!

graemeleehickey/joineRML

R package for fitting joint models to time-to-event data and multivariate longitudinal data

insightsengineering/teal.modules.clinical

Provides teal modules for the standard clinical trials outputs

Merck/pkglite

Compact Package Representations

clinicedc/edc

Modules for clinical trials research data collection and data management - overview

dhimmel/clintrials

Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov

gpaux/Mediana

Clinical Trial Simulations

asancpt/CDISC

I'm collecting information regarding CDISC

insightsengineering/teal.gallery

A Gallery of Exploratory Web Apps used for Analyzing Clinical Trial Data

openlifescience-ai/ai-deadlines

ZohraRezgui/Webscraping-ClinicalTrials

Extracting Inclusion/Exclusion criteria and other information from clinicaltrials.gov

adrianolszewski/Logistic-regression-is-regression

Despite the popular yet wrong claim that logistic regression "is not a regression", it's one of the key regression and hypothesis testing tools in epxerimental research (like clinical trials). I will share information from my field to break the weird situation where I am told that what I and lots of statisticians do on daily basis cannot be done.

pipetcpt/trainees

PIPET 수련생을 위한 실습교육자료입니다. (R, NCA, Rmarkdown, data science, 임상시험, 약동학/약력학, 논문발표 등)

seandavi/ci4cc-informatics-resources

Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.

openpharma/simaerep

simulate adverse event reporting in clinical trials with the goal of detecting under-reporting sites.

rpact-com/rpact

rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

DIDSR/VICTRE_PIPELINE

Home for the unified VICTRE pipeline for in silico breast imaging.