clusterprofiler

There are 7 repositories under clusterprofiler topic.

  • YuLab-SMU/biomedical-knowledge-mining-book

    :books: Biomedical knowledge mining using GOSemSim and clusterProfiler

    Language:TeX72102829

  • raymondkiu/R-scripts-graphing-statistics

    My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq

    Language:R10202

  • ycl6/GO-Enrichment-Analysis-Demo

    Working Demo on GO Enrichment Analysis using topGO, clusterProfiler and Enrichr/enrichR. Visit repo website for HTML output

    Language:R4231

  • francescopatane96/RNA-seq_Pipeline

    Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last module of the project allows you to use clusterprofiler in order to perform ORA and GSEA analysis (over-representation analysis and gene set enrichment analysis) using GeneOntology (GO), disease ontology (DO), KEGG, reactome eg...

    Language:Jupyter Notebook2101

  • albertme0308/GSApp

    GSApp Pathway Analysis

    Language:HTML1100
  • cpbnplot

    noriakis/cpbnplot

    Bayesian network plot for the enrichment analysis results

    Language:Jupyter Notebook1210

  • tpurcell0122github/Trade-Ahead

    An investment advisory firm needs to segment stock offerings so they may offer their customers understandable investment options.

    0100