compositional-data
There are 29 repositories under compositional-data topic.
stefpeschel/NetCoMi
Network construction, analysis, and comparison for microbial compositional data
meringlab/FlashWeave.jl
Inference of microbial interaction networks from large-scale heterogeneous abundance data
JuliaEarth/CoDa.jl
Compositional data analysis in Julia
boehm-s/fun-php
Functional programming utilities for PHP
Vision-CAIR/3DCoMPaT
Official repository for the 3DCoMPaT dataset (ECCV2022 Oral)
ofgulban/compoda
Simplex space operations for compositional data implemented in Python.
simhag/Compositional-Pre-Training-for-Semantic-Parsing-with-BERT
Implementation of Semantic Parsing with BERT and compositional pre-training on GeoQuery
lch14forever/beem-static
📦BEEM-Static: An R package for inferring microbial interactions based on Lotka-Volterra models
mpascariu/CoDa
Forecast mortality using Compositional Data Lee-Carter model - R Package
nphdang/DeepCoDA
Deep learning for personalized interpretability for compositional health data
tesselle/nexus
:globe_with_meridians: Sourcing Archaeological Materials by Chemical Composition
Japal/zCompositions
Imputation of zeros, nondetects and missing data in compositional data sets
tystan/simplexity
Hopefully taking out the complexity of using the simplex: functions to generate, manipulate and plot data on the simplex
avisionh/analysis-structuralbreak
Practical introduction to modelling and testing for structural breaks in time-series data.
FrederickHuangLin/SECOM-Code-Archive
Archive: Data, scripts, and outputs for the paper "Sparse Estimation of Correlations among Microbiomes (SECOM)". Please check our ANCOMBC R package for the most up-to-date SECOM functions.
ajmolstad/SpPDCC
R package for estimating sparse and positive definite basis covariance matrices from compositional data
kkdey/dash
Dirichlet adaptive shrinkage for compositional data
kkdey/dashr
R package for Dirichlet adaptive shrinkage and smoothing
seungwoo-stat/20th-PE-forecast
Forecasting the four-party vote share of the 20th presidential election of Republic of Korea
andyphilips/dynsimpie
Stata module to examine dynamic compositional dependent variables
dadosdelaplace/dadosdelaplace
About me: mathematician, PhD Stats, Assistant Professor and scicomm
fpavone/pacs_spline_density
splineDensity Rpackage: Density estimation with smoothing B-spline
jhhughes256/comp_app
Web applications for use with compositional data. Post-graduate work for Dr. Dot Dimuid and Prof. Timothy Olds at University of South Australia.
lm687/CompSign
CompSign: An R package for differential abundance of compositional mutational signatures
mspreafico/BO06-LOTox
Longitudinal Latent Overall Toxicity (LOTox) profiles in osteosarcoma: a new taxonomy based on latent Markov models.
seungwoo-stat/south-korea-election
Presidential election data set from South Korea
nfrerebeau/TaphoCeram
Replication of Frerebeau, N., Ben Amara, A. and Cantin, N. (2020)
SamGalanakis/SimilarSummonersGraph
Using champion mastery data from Rot games API to visualize champion connections based on correlation metrics of compositional data in a network. Unsupervised learning was also used to categorize the champions. Lastly, weighted graph distance was used to make a recommender system for new champions based on played chamoions input.