count-data

There are 27 repositories under count-data topic.

  • PLN-team/PLNmodels

    A collection of Poisson lognormal models for multivariate count data analysis

    Language:R55511318
  • OUTRIDER

    gagneurlab/OUTRIDER

    OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data

    Language:R50113811

  • jalal246/textics

    📉 JavaScript Text Statistics that counts lines, words, chars, and spaces.

    Language:JavaScript36403
  • rpact

    rpact-com/rpact

    rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

    Language:R254355

  • anjalisilva/MPLNClust

    R Package With Shiny App to Perform and Visualize Clustering of Count Data via Mixtures of Multivariate Poisson-log Normal Model

    Language:R16204

  • TeamMacLean/atacr

    Analysing Capture Seq Count Data

    Language:R14500

  • tqch/poisson-jump

    Official Implementation of Paper "Learning to Jump: Thinning and Thickening Latent Counts for Generative Modeling" (ICML 2023)

    Language:Python10201

  • anjalisilva/mixMVPLN

    R Package to Perform Clustering of Three-way Count Data Using Mixtures of Matrix Variate Poisson-log Normal Model With Parameter Estimation via MCMC-EM, Variational Gaussian Approximations, or a Hybrid Approach Combining Both.

    Language:R7100

  • BioGenies/countfitteR

    Language:CSS4304

  • GeoBosh/Countr

    R package for flexible univariate count models based on renewal processes

    Language:R4031

  • ihmeuw-msca/CorrelatedCounts

    Modeling correlated count data

    Language:Python4500

  • jalal246/textics-stream

    Text Statistics For Node Streams

    Language:JavaScript440

  • MFaymon/spINAR

    Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.

    Language:R4121

  • blog-neas/INAr

    Generation, estimation and testing of INteger Autoregressive models

    Language:C++2110

  • cakraawijaya/WB-Register

    Web Programming Class | Final Project | Campus Assignment

    Language:PHP200

  • krishan57gupta/ROSeq

    ROSeq - A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.

    Language:R2200

  • vpnsctl/mixpoissonreg

    Mixed Poisson Regression for Overdispersed Count Data

    Language:R2100

  • ICON-in-R/NMA

    Minimal network meta-analysis with BUGS from R.

    Language:R12280

  • louisowen6/GLM_CountData

    Mortality Rate Prediction based on Age and Cigarette Types in Canada using Generalized Linear Model for Count Data

    120

  • zipkinlab/Davis_etal_2022_EcolAndEvol

    Davis, K. L., Silverman, E. D., Sussman, A. L., Wilson, R. R., Zipkin, E. F. (2022). Errors in aerial survey count data: Identifying pitfalls and solutions. Ecology and Evolution 12:e8733.

    Language:R120

  • dilsaddt/AldabraAtoll_Aldabra_giant_tortoise_seasonal_habitat_use

    Analysis of seasonal habitat-use patterns of Aldabra giant tortoises of Aldabra Atoll, Seychelles using temporary emigration models.

    Language:R0100

  • junsoukchoi/ZiGDAG

    R package for model-based causal discovery for zero-inflated count data

    Language:R0100

  • marinavannucci/dmbvs

    R/C code for Bayesian variable selection for Dirichlet-multinomial regression models. Accompany paper: Wadsworth et al. (2016). An Integrative Bayesian Dirichlet-Multinomial Regression Model for the Analysis of Taxonomic Abundances in Microbiome data. BMC Bioinformatics 18:94.

    Language:C0001

  • niamhmimnagh/TriplePoisson

    A Bayesian model designed to estimate animal abundance from limited or scarce data on vestiges, such as faeces counts or other indirect indicators of presence. The approach is particularly useful in situations where direct observations of animals are challenging or impractical.

    Language:R00

  • sandialabs/sparten

    Language:C++0100

  • cpauvert/PLNnetwork-workflow

    Infer network from count data within Snakemake using a sparse Poisson lognormal model (PLNnetwork)

    Language:R14

  • jemus42/poisson-regression

    Poisson-Regression und ihre Leiden

    Language:TeX20