count-data

There are 25 repositories under count-data topic.

  • PLN-team/PLNmodels

    A collection of Poisson lognormal models for multivariate count data analysis

    Language:R53710619
  • OUTRIDER

    gagneurlab/OUTRIDER

    OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data

    Language:R47123410

  • jalal246/textics

    📉 JavaScript Text Statistics that counts lines, words, chars, and spaces.

    Language:JavaScript36503
  • rpact

    rpact-com/rpact

    rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

    Language:R213224

  • anjalisilva/MPLNClust

    R Package With Shiny App to Perform and Visualize Clustering of Count Data via Mixtures of Multivariate Poisson-log Normal Model

    Language:R16204

  • TeamMacLean/atacr

    Analysing Capture Seq Count Data

    Language:R14600

  • tqch/poisson-jump

    Official Implementation of Paper "Learning to Jump: Thinning and Thickening Latent Counts for Generative Modeling" (ICML 2023)

    Language:Python11201

  • anjalisilva/mixMVPLN

    R Package to Perform Clustering of Three-way Count Data Using Mixtures of Matrix Variate Poisson-log Normal Model With Parameter Estimation via MCMC-EM, Variational Gaussian Approximations, or a Hybrid Approach Combining Both.

    Language:R8100

  • BioGenies/countfitteR

    Language:CSS4403

  • GeoBosh/Countr

    R package for flexible univariate count models based on renewal processes

    Language:R4031

  • ihmeuw-msca/CorrelatedCounts

    Modeling correlated count data

    Language:Python4500

  • jalal246/textics-stream

    Text Statistics For Node Streams

    Language:JavaScript440

  • MFaymon/spINAR

    Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.

    Language:R4221

  • blog-neas/INAr

    Generation, estimation and testing of INteger Autoregressive models

    Language:R2110

  • krishan57gupta/ROSeq

    ROSeq - A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.

    Language:R2200

  • vpnsctl/mixpoissonreg

    Mixed Poisson Regression for Overdispersed Count Data

    Language:R2100

  • devancakra/WB-Register

    Web Programming Class | UPN Veteran Jatim | Website-Bot Register for Robotics community | Final Project

    Language:PHP1100

  • ICON-in-R/NMA

    Minimal network meta-analysis with BUGS from R.

    Language:R12280

  • louisowen6/GLM_CountData

    Mortality Rate Prediction based on Age and Cigarette Types in Canada using Generalized Linear Model for Count Data

    120

  • dilsaddt/AldabraAtoll_Aldabra_giant_tortoise_seasonal_habitat_use

    Analysis of seasonal habitat-use patterns of Aldabra giant tortoises of Aldabra Atoll, Seychelles using temporary emigration models.

    Language:R00

  • junsoukchoi/ZiGDAG

    R package for model-based causal discovery for zero-inflated count data

    Language:R0100

  • marinavannucci/dmbvs

    R/C code for Bayesian variable selection for Dirichlet-multinomial regression models. Accompany paper: Wadsworth et al. (2016). An Integrative Bayesian Dirichlet-Multinomial Regression Model for the Analysis of Taxonomic Abundances in Microbiome data. BMC Bioinformatics 18:94.

    Language:C0001

  • cpauvert/PLNnetwork-workflow

    Infer network from count data within Snakemake using a sparse Poisson lognormal model (PLNnetwork)

    Language:R14

  • jemus42/poisson-regression

    Poisson-Regression und ihre Leiden

    Language:TeX30

  • zipkinlab/Davis_etal_2022_EcolAndEvol

    Davis, K. L., Silverman, E. D., Sussman, A. L., Wilson, R. R., Zipkin, E. F. (2022). Errors in aerial survey count data: Identifying pitfalls and solutions. Ecology and Evolution 12:e8733.

    Language:R20