crispr-cas

There are 8 repositories under crispr-cas topic.

  • Russel88/CRISPRCasTyper

    CCTyper: Automatic detection and subtyping of CRISPR-Cas operons

    Language:Python8935316

  • nf-core/crisprseq

    A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).

    Language:Nextflow251394725

  • crisprVerse/Tutorials

    Tutorials for the crisprVerse

    Language:TeX10150

  • schmidt73/guidescan-web

    A guideRNA design tool for the modern era.

    Language:Clojure8202

  • USDA-ARS-GBRU/GuideMaker

    GuideMaker: Software to design CRISPR-Cas guide RNA pools in non-model genomes

    Language:Python63143

  • srcastillo/NGS-Analyzer

    This repository includes scripts for sequencing data analysis

    Language:Jupyter Notebook2100

  • USask-BINFO/AcrTransAct

    Implementation of the paper "AcrTransAct: Pre-trained Protein Transformer Models for the Detection of Type I Anti-CRISPR Activities"

    Language:Python1101

  • UPOBioinfo/crispromeskape

    Scripts to analyze the data for the paper "An outstanding bacterial membranome requires CRISPR-Cas systems to avoid the intervention of phages" and derive the figures or subfigures shown in the manuscript.

    Language:Python0301