eqtl-mapping

There are 10 repositories under eqtl-mapping topic.

  • soedinglab/tejaas

    Tejaas - a tool for discovering trans-eQTLs

    Language:C10570

  • naim-panjwani/LocusFocus

    Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)

    Language:JavaScript9334

  • BrunildaBalliu/FastGxC

    Computationally efficient and statistically powerful software for detecting context-specific eQTL effects in multi-context genomic studies.

    Language:R7233

  • hruffieux/atlasqtl

    atlasqtl R package - Fast global-local hotspot QTL detection

    Language:R6302

  • pllittle/CSeQTL

    Cell type-specific eQTL mapping

    Language:HTML3101

  • pllittle/CSeQTLworkflow

    This readme repository contains sample codes for executing steps within our manuscript

    Language:HTML3111

  • dvav/eQTLBookChapter

    Book chapter on Bayesian eQTL mapping using Stan

    Language:R1100

  • Genome3d/blood-metabolites-regulation

    Language:Python1601

  • jawa23bio/cEpiReg

    Our comprehensive database integrates data from scRNA seq and sc-ATAC seq, identifying cis-regulatory elements (CREs) through comparison with ENCODE, Epimap, GWAS Catalog, and other datasets. By connecting transcription factors (TFs), CREs, and target genes, cEpiReg unveils hidden regulatory links crucial for understanding AD pathogenesis.

    Language:HTML1100

  • maxozo/eqtl

    Language:Python00