fitness-landscape

There are 12 repositories under fitness-landscape topic.

  • westlake-repl/ProteinLM-TDG2-Mutation

    Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing

    Language:Jupyter Notebook11131

  • yoavram/UnderTheRug

    Repo for "Evolution on rugged adaptive landscapes"

    Language:Jupyter Notebook11407

  • louisgt/SodaPop

    A tool for multiscale forward-time simulation of protein evolution.

    Language:C++7376

  • lettier/bbautotune

    Blender/Bullet automatic parameter tuning/learning.

    Language:TeX4301

  • thomas-vogel/sapienzdiv-ssbse19

    SAPIENZ^div @ SSBSE 2019: Does Diversity Improve the Test Suite Generation for Mobile Applications?

    Language:Python4103

  • thomasWeise/BBDOB_W_Model

    The W-Model, a tunable Black-Box Discrete Optimization Benchmarking (BB-DOB) problem, implemented for the BB-DOB@GECCO Workshop.

    Language:Java4303

  • ahmedaq/PV-vp1

    Software for inferring the intrinsic fitness landscape of poliovirus capsid protein (vp1) and comparing it with that of analogous proteins in HIV

    Language:MATLAB1100

  • ayushkarnawat/profit

    Exploring evolutionary protein fitness landscapes

    Language:Python12670

  • marcosdg/ppsn-2018

    Bridging Elementary Landscapes and a Geometric Theory of Evolutionary Algorithms: First Steps (PPSN 2018)

    Language:Mathematica1100

  • rrrlw/fitness

    Software library providing fitness landscape functionality in R.

    Language:R124

  • rpreen/nkcs

    NKCS model for exploring aspects of (surrogate-assisted) coevolution.

    Language:Python0201

  • cbg-ethz/covvfit

    Fitness estimates of SARS-CoV-2 variants

    Language:Python40