genotype-data
There are 12 repositories under genotype-data topic.
zhaofengli/snappy
Helps you browse through and interpret your genotype data
sigven/vcf2tsvpy
Genomic VCF to tab-separated values
cibiobcg/EthSEQ
Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data
esohkevin/gwas-tips
tips and tricks in genome-wide association studies - a tutorial
poseidon-framework/poseidon-hs
A toolset to work with modular genotype databases in the Poseidon format
poseidon-framework/poseidon-framework.github.io
Main landing page for getting information about the Poseidon project
bguo068/ishare
a Rust crate designed to facilitate the analysis of rare-variant sharing and identity-by-descent (IBD) sharing.
mr-eyes/genoFreq
summarize and visualize the genotypes categories per sample in a VCF file
nevrome/paagen
Experiments with the genotype data generators in xerxes
epsalazarf/aDNAxRefPanel
A pipeline to merge ancient DNA sequencing data with modern genotyping data
mode1990/Genotype_Imputation_hardcall
This short script facilitates the conversion of binary genotypes to VCF format, followed by chromosome-specific splitting for subsequent imputation using Minimac4. It then performs a hard-call to select high-quality imputed SNPs, generating a new binary dataset
jbradach/dna
Raw data from 23andMe's genotyping of James Bradach's DNA