grna-sequence

There are 14 repositories under grna-sequence topic.

crisprVerse/crisprDesign
Comprehensive design of CRISPR gRNAs for nucleases and base editors
Language:R19 2 316
crisprVerse/crisprScore
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Language:Python13 2 173
crisprVerse/crisprVerse
Collection of R packages that work in harmony for CRISPR gRNA design
Language:R11 1 10
crisprVerse/Tutorials
Tutorials for the crisprVerse
Language:TeX10 1 50
crisprVerse/crisprDesignData
Useful human and mouse data for the crisprVerse ecosystem
Language:R5 1 10
crisprVerse/crisprViz
Visualization of CRISPR guide RNAs (gRNAs)
Language:R5 1 01
bretonics/CHOMP
Search guide-RNA sequences given a genome or gene sequence
Language:Perl4 2 191
crisprVerse/crisprBase
Base functions and classes for CRISPR gRNA design
Language:R4 1 10
AlexJSully/SciGrade
SciGrade is an online web-tool that allows students (or any user with access) to mark and assist in gRNA+Primer generation.
Language:JavaScript2 2 01
crisprVerse/crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
Language:R2 1 10
crisprVerse/crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
Language:R1 1 00
crisprVerse/crisprScoreData
Pre-trained models for the crisprScore package
Language:R1 1 0
amatur/CRISPR-nRef-gRNA-Design
Language:Shell0 3 00
bmds-lab/Crackling-phased
*HaploCrackling* -- The Crackling-based method for variant-aware, whole-genome CRISPR-Cas9 target detection
Language:C++0 0 00